| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_07171 |
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| Symbol | secF |
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| ID | 5731743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 627938 |
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| End bp | 628906 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641285080 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001550602 |
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| Protein GI | 159903258 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.434985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.295105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTTCTT CTCCAGTTCA TAAAACAAAA TTGATTTTCC CTGTTACTCG TCATAGATAT
AAGATTTGGC TAGTTTCTGG CTTGGCAGTA ATTATTAGTA TCGCAGGCTT GATTTCATGC
TGGTTAAACC CATTAATAGG TTATCCGCTT CGCCCTGGAC TTGATTTTAC AGGGGGTACA
CAAATAAAAC TTGAACGTCA ATGTAATGAT GAATGCAATC CAATAAGGAC TTCAAATGTT
ACGGAGCTAT TACGAGAAAT CCCCTTGAAT ACTTCTGGAA ACGAATCATC TCCAAATTTA
TCAATAGCGA GAGTTCAGTT CCTAGACGGA TATAAATCAA TCTTAGTAAG ATTGCCTTTC
TTAACTGCTT CTCAAGCAGA AAAAGTGGCA CAAGCATTGG ATCCAATCGC AGGCCCTTTT
CAGCCTGGAG GACAATCTAT AGATACGATT GGCCCTACTT TAGGCGCTCA GTTACTTAAA
AGTAGTTTGA TATCTTTGTT GGTGGCATTT AGTGGGATAG CAGTTTATAT AAGCTATAGA
TTTGACAAGA CCTTTGCCTT GTTAGCGCTT GTAGCTTTAT CTCATGATGT ATTGATTGTA
TGTGGTGTAT TTGCTTGGCT TGGGATATTT TTAAACTTGG AGGTTAATAG TCTTTTCGCA
GTTGCATTGT TAACAATTTC AGGATATTCA GTAAATGATA CTGTAGTTGT ATTTGATAGG
ATTCGTGAGA TTAATTCCTC AGCTAATTCA TTAGGTTTTA ACCAAAAGAT AGATTTTGCA
GTATCTGCGA CATTATCAAG AACTTTATAT ACAAGCTTAA CTACTTTATT GCCTTTAGGA
GCATTGATAT TTTTTGGAGG GGACACCTTG TTTTGGTTCT CAGTTGCTTT GGCATTAGGT
GTAACTGTGG GCAGTTGGTC AAGTATTGCT TTAGCACCTT CATTGTTAAG CTTGAGATCT
GAAGTATGA
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| Protein sequence | MSSSPVHKTK LIFPVTRHRY KIWLVSGLAV IISIAGLISC WLNPLIGYPL RPGLDFTGGT
QIKLERQCND ECNPIRTSNV TELLREIPLN TSGNESSPNL SIARVQFLDG YKSILVRLPF
LTASQAEKVA QALDPIAGPF QPGGQSIDTI GPTLGAQLLK SSLISLLVAF SGIAVYISYR
FDKTFALLAL VALSHDVLIV CGVFAWLGIF LNLEVNSLFA VALLTISGYS VNDTVVVFDR
IREINSSANS LGFNQKIDFA VSATLSRTLY TSLTTLLPLG ALIFFGGDTL FWFSVALALG
VTVGSWSSIA LAPSLLSLRS EV
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