Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_05751 |
Symbol | trpA |
ID | 5730276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 538547 |
End bp | 539362 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641284935 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001550460 |
Protein GI | 159903116 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAATC AATCTGTAAA AAACTCAAGC ATTAGCCAAT GCTTTGCAAA GTTAAAGAAA GAAGGACGTA TTGCATTAAT GCCTTTTGTT ATGGCTGGTG ACCCAGACTT ACAAACATCG GCAGAAATTT TGTTAAAGCT ACAGGAAAAA GGAGCTGACA TTATTGAATT GGGCATTCCA TATAGTGATC CACTTGCAGA CGGTCCAATA ATTCAGTTAG CAGCATCGCG TGCACTTTCT TCGGGTACTT CGCCAGGACG AGTTTTAGAA ATGTTGGATA GTTTGAGGGG AAAACTAACT ATTCCTTTAG TGCTTTTTAC TTATAGCAAT CCTTTGCTTA ATCGCGGTAT GGAACGTTTT TGTGATGAGG CTTCTGCTGC AGGAGCTGCA GGTTTGGTTG TACCTGATCT GCCATTGGAA GAAGCCGATA AATTGTCTCC AATTGCTTCA GAAAAAGGGC TAGATTTGGT TCTTTTAGTT GCACCTACCA CACCTCATGA AAGAATGAGG AGGATATTTA GCAAAAGCAA TGGTTTTACT TATCTGGTAA GTGTTACTGG TGTTACTGGA GAGCGTTCTG GATTAGAAAA TCGTGTTCAG TCTCTTATTA AACAATTAAA AGAATTTGGC CCAAGTCCTG TTGCTGTTGG TTTTGGAATT TCCGACTCTA AAGATGTTGC TCAAGTTAAG AATTGGGGGG GCGACGGAGC AATTGTTGGT AGCGCATTAG TAAAAAGGAT TTCAAATTCA GCTCCTGGAT GTGCAGTTGA TGATGCTGGT AATTTTTGTA GTGAGCTGCG TAAAGCAGCA GGTTAA
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Protein sequence | MSNQSVKNSS ISQCFAKLKK EGRIALMPFV MAGDPDLQTS AEILLKLQEK GADIIELGIP YSDPLADGPI IQLAASRALS SGTSPGRVLE MLDSLRGKLT IPLVLFTYSN PLLNRGMERF CDEASAAGAA GLVVPDLPLE EADKLSPIAS EKGLDLVLLV APTTPHERMR RIFSKSNGFT YLVSVTGVTG ERSGLENRVQ SLIKQLKEFG PSPVAVGFGI SDSKDVAQVK NWGGDGAIVG SALVKRISNS APGCAVDDAG NFCSELRKAA G
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