Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_01441 |
Symbol | tmk |
ID | 5730228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 139907 |
End bp | 140554 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641284488 |
Product | thymidylate kinase |
Protein accession | YP_001550029 |
Protein GI | 159902685 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.65977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAC ACTTTATTGT TTTAGAAGGT ATCGATGGAT GTGGAAAAAG TACTCAAATA AGTCATATTT CCAAATGGCT GCCGCAAAGT GGATTGATGC CAAAAAATGC AAATCTATAT ATTACGCGTG AACCTGGCGG GACAACTTTG GGAAAGTCAT TAAGAGATTT ACTACTCCAT GAGCATGAAA CTAACGTCCC TGCACCATTA ACAGAGCTTT TATTATATGC AGCAGACAGA GCCGAACATA TTCATAGCTT GATTCAGCCA AAACTGGACA AAGGAGACTG GGTTATCAGT GATCGTTTTA GCGGATCAAC CTTGGCATAT CAAGGTTTTG GAAGAGGTCT AGATATTAAT TTAATCCGAA GACTAGATGC AATAGCAAGA CAGGGTTTAG TGCCAGAAAT AACAATTTTT TTAAAAATTT CAGTCTTGAC AAGTATGAGA AGAAGAGCAA AAAAATCTGC AGATCGCATG GAAGCTGAAG GTGAAGGCTT CCTGAAGAAA GTAGCTTCCG GATTTTCGAG AATAGCCAAT GAAGAGCACT GGATCACAAT TGAAGGTGAA CAAGATCAAG CTTTAGTAAG CGACGAAATA AAGCTCGCTA TAACCAATAA GTTGAAAAAT TATATCTCTA ATAATTAA
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Protein sequence | MKGHFIVLEG IDGCGKSTQI SHISKWLPQS GLMPKNANLY ITREPGGTTL GKSLRDLLLH EHETNVPAPL TELLLYAADR AEHIHSLIQP KLDKGDWVIS DRFSGSTLAY QGFGRGLDIN LIRRLDAIAR QGLVPEITIF LKISVLTSMR RRAKKSADRM EAEGEGFLKK VASGFSRIAN EEHWITIEGE QDQALVSDEI KLAITNKLKN YISNN
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