| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_00521 |
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| Symbol | speA |
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| ID | 5730160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 55844 |
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| End bp | 57790 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641284394 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001549937 |
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| Protein GI | 159902593 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.234716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCAAAT CCAAGCCCCT CACTAAGAAA AATGACTGGT CTGTTGAAGA CAGTACTGTT
TTATATCGAC TGGATAAATG GGGGAAAGAT TATTTCTCAA TTAATGAATC TGGAAATATA
AAAGTCAGTC CGACGGGGCC TGAAGGTGAT TCATTAGATT TAATGGTATT AGTTAAAGAA
CTGAATAGTC GCAATCTAAA GTCACCTCTT TTACTTCGTT TCGATGACAT TCTTGAAGAC
AGAATCAAAA AATTACATGG TGCTTTTAAA AATGCAATTT CACATTATGA GTATGAAGGA
GAATATAAAG GTGTCTTTCC AATCAAATGC AACCAGCAGC GACATGTTGT CGAAGAAATA
GTTACATGTA GCCGAGAATG GCATTTCGGC CTCGAGGCTG GAAGCAAAGC AGAATTATTA
ATAGCACTTT CCTTATTAGA TGACCCTGAA GCATTACTAA TTTGCAATGG TTACAAAGAT
AAGCGTTATA TAGAAACATC TATTTTAGCA AGACAATTAG GAAGGAAACC TATAGTAGTT
ATTGAACAAT TAGATGAAGT TGATCGCATT ATCAATGCTA CTAAGAAAAT TGGATCTGCA
CCCTTTATAG GTATAAGAGC AAAATTATCG AGTCAAAGTA GTGGTAGATG GAGCAACTCT
ATTGGAGAAA AATCTAAATT CGGCCTATCA ATACCAGAAA TATCTCAAGC AGTCCAACAA
TTAAAAGATG CGGGCCTGCT CAAAGAATTA ATTCTTCTAC ATTTCCACAT AGGGAGCCAA
ATTAATGACA TAGCAGTTTT GAAGAATGCA TTGCAAGAAG CCAGTCATAT TTATATCGAA
TTAAAGCGCC TAGGAGCACC AATGGGTCAT CTTGATGTGG GGGGTGGCTT AGGAATCGAT
TACGATGGTA GTCGTACGGC AACACAAGCC TCTACAAATT ATTCACTTCA AAATTATGCA
AACGATGTAG TAGCCACCAT TCAAGAATGC TGTAAAGAGA ACCAAGTCCA AGTACCAACC
TTAGTGAGTG AAAATGGAAG AGCCGTTTCT AGTCATTTCT CAATATTAGT TTTTAATGTT
TTAGGAACCA GCTCAATTCC TAGTGATACT CGAGCAACAA CAGAACATGA GTGTCTCAGT
GTTCAAAATC TACGTCAAAC ATTAAGATCT CTAAGTGAAG AGCCACACAA TATTGGCGTT
GATATCTCAA GGTTGCAAGA AGCATGGAAC GACGCACTTA AATTTAAAGA AGATGCATTG
GCTGCATTCC GTTTAGGGTA CATAGGTCTG GAAGAACGAG CTAAGGCAGA GCAACTTACC
TGGGCCTGTG CAAAAGCATT AGCGGTGAAA CTGCCAAAAG ACACTTTGAT TCCTGAAGAA
CTAAATGCAC TTAATGCAGC ACTAGCTGAG ACCTATTACG CCAATATATC TATTTTTCGT
TCAGCACCTG ATACATGGGC CATTGGCCAA CTCTTCCCAA TAATGCCCAT ACATCGACTA
AATGAAAAGC CAACTCAACT AGGGCATTTT GCTGATTTAA CTTGTGATTC AGATGGTAAA
TTATCGAAAT TTATTGATAA TGGACAAGCT AAATCTCTGA TTGAGTTGCA TAGGCTTAAC
TCTAATGAAG ATTATTTGAT AGGCATGTTT CTAGGAGGGG CATACCAAGA AGTGATGGGC
AATCTCCATA ATCTATTTGG AAGTACGAAT TCGATACATA TCCGCATGGC AAAAAATGGA
GGGTACAAAT TAGATCACGT TATTCGTGGG GATACAAAAG CAGAAGTACT TAATGCAATG
GAACATGACT CCGAGCAATT ATTAGAAAGA CTGCGAATAG CGAGCGAATC AGCTATACAA
CAAGGAAAGT TAAAAATCAA TGATGCTCAA CGCTTAATAG AACATGTAGA AACCAGTCTT
AGGCAAAGCA CATATTTACA AGAATAA
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| Protein sequence | MSKSKPLTKK NDWSVEDSTV LYRLDKWGKD YFSINESGNI KVSPTGPEGD SLDLMVLVKE
LNSRNLKSPL LLRFDDILED RIKKLHGAFK NAISHYEYEG EYKGVFPIKC NQQRHVVEEI
VTCSREWHFG LEAGSKAELL IALSLLDDPE ALLICNGYKD KRYIETSILA RQLGRKPIVV
IEQLDEVDRI INATKKIGSA PFIGIRAKLS SQSSGRWSNS IGEKSKFGLS IPEISQAVQQ
LKDAGLLKEL ILLHFHIGSQ INDIAVLKNA LQEASHIYIE LKRLGAPMGH LDVGGGLGID
YDGSRTATQA STNYSLQNYA NDVVATIQEC CKENQVQVPT LVSENGRAVS SHFSILVFNV
LGTSSIPSDT RATTEHECLS VQNLRQTLRS LSEEPHNIGV DISRLQEAWN DALKFKEDAL
AAFRLGYIGL EERAKAEQLT WACAKALAVK LPKDTLIPEE LNALNAALAE TYYANISIFR
SAPDTWAIGQ LFPIMPIHRL NEKPTQLGHF ADLTCDSDGK LSKFIDNGQA KSLIELHRLN
SNEDYLIGMF LGGAYQEVMG NLHNLFGSTN SIHIRMAKNG GYKLDHVIRG DTKAEVLNAM
EHDSEQLLER LRIASESAIQ QGKLKINDAQ RLIEHVETSL RQSTYLQE
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