Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_00281 |
Symbol | pdxA |
ID | 5730872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 29075 |
End bp | 30121 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641284370 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001549913 |
Protein GI | 159902569 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.105984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATT CAAACAATAA ACACAAAGAC CGCTTGGTTA TCTCATTAGG AGATCCTGCA GGCATTGGGC CTGAGGTAGT CCTCAAAGCA CTTAGGTCCT TGGACTTACC TAGAAATATG CAACCTTTGT TAGTCGGATG CAAACAGACT ATTGAAATGA TCTATACAAA ACTGAAAGCC CAAGGTATTC AATCTTTAGC TGACCCTGGT TCTCTAGACA TAGAAGATAT TCCTTGTGAA GGGAAAATCT ATATAGGAGA ATCGAATACA GCAAGTGGCG AAGCTAGCTT TCAATGGCTT ACCCGAGCCA CTGAATTAAT TCTGGAAGGT CAAGGAAAAG CTCTTGTAAC TGCACCAATC GCGAAATATG CATGGCATCA GGCAGGACAT AAATATCCAG GACAAACTGA ACGTTTAGGA GAACTTACAA ATGTTGAGAA ACCATCAATG CTGTTTACCG CAATATCACC TCACAATGCC TGGAGGTTAA ATACCCTTCT TGCTACTACC CACATACCTT TAGAAGCTGT TCCTAAAAAA TTAAGTCCCG AAATAATCAA TGCAAAATTA AATACACTAT TAGATTTTTG CCAACAATTT AAAGATATGC CCAAATTACT GATAGCAGGT CTAAATCCTC ATGCTGGAGA AAATGGCCAA CTAGGTAATG AAGAAATTCA ATGGATCATT CCCACTATCG AAATTTGGAA ACAAAATCAT CCAAATATTA AACTTGATGG GCCTATGTCC CCAGACACAT GCTGGATTTC AGCTGCAAAG TCTTGGCAAG GTAAGCCAGA TCCAAATGCC CCAGACGGTA TTTTGGCTCT CTATCATGAT CAAGGATTGA TTCCAATCAA ATTAATTGCA TTTGAGTCAG CAGTTAATAC AACCTTAGGC CTACCATTTA TTCGTACTTC TCCTGATCAC GGAACAGGTT TTGATATTGC TGGTAAAGGA GTTGCTTGCT TTAAAAGCAT GAAGTCAGCC TTAGAAGTGG CTTGGGAGTT ATCTAATTAT TCACAAAAGA AGCTCAAAGA GGTTTAA
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Protein sequence | MSNSNNKHKD RLVISLGDPA GIGPEVVLKA LRSLDLPRNM QPLLVGCKQT IEMIYTKLKA QGIQSLADPG SLDIEDIPCE GKIYIGESNT ASGEASFQWL TRATELILEG QGKALVTAPI AKYAWHQAGH KYPGQTERLG ELTNVEKPSM LFTAISPHNA WRLNTLLATT HIPLEAVPKK LSPEIINAKL NTLLDFCQQF KDMPKLLIAG LNPHAGENGQ LGNEEIQWII PTIEIWKQNH PNIKLDGPMS PDTCWISAAK SWQGKPDPNA PDGILALYHD QGLIPIKLIA FESAVNTTLG LPFIRTSPDH GTGFDIAGKG VACFKSMKSA LEVAWELSNY SQKKLKEV
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