Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_00081 |
Symbol | nusB |
ID | 5730007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 11415 |
End bp | 12050 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641284350 |
Product | transcription antitermination protein NusB |
Protein accession | YP_001549893 |
Protein GI | 159902549 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000149068 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAATCTC GATCTATTTC TAGAGAAATT GCACTTTTGG TATTAGGTCA GATTTCAGAT AAACAAATTA ATAACATAGA AGATATATCA CTCGAAGATT TATTAATGCT TGGCCTTGAA ACTCTTATGA ATCATTTGAG GGAGCAATTA GATTTCTGTG CTGTTCAGCT TGAATCAGCG CAAGAGCAAT TACTGGATAG TGAATTGGAA AGCTGTGAGA AAACATCAGC TTCTAAAATT AGAAATCATT TAGAGACTTC TTTAAATCAC TCACGAGATA TTATAAATAG TTTGTCTGAT AGCTTAGAAT TAACAACACT CTTGGCTTTA TCTGATCAAG TTAATATTCG GGAAGATGCA ATTCAAAGGG TAAGTTTAGT TTTGCAAAAT TTACAGAGTA TTAATTTAAA TCTAGATGAA GTTATGGATG GATGGCGATT AAAACGTTTG CCAAGAATTG ATCAGGATAT TCTCAGACTT GCATATATAG ACATACATAT ATTAAATGCT CCAATTGCTG TTGCTTGTAA TGAAGCTGTA AATCTTGGTA ATAAATATAG TGATAAACAA GGAAGGCGAA TGATTAATGG TATTTTAAGG AGACTACAAA ATTCTGATTC AATTAATATT GCCTAA
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Protein sequence | MQSRSISREI ALLVLGQISD KQINNIEDIS LEDLLMLGLE TLMNHLREQL DFCAVQLESA QEQLLDSELE SCEKTSASKI RNHLETSLNH SRDIINSLSD SLELTTLLAL SDQVNIREDA IQRVSLVLQN LQSINLNLDE VMDGWRLKRL PRIDQDILRL AYIDIHILNA PIAVACNEAV NLGNKYSDKQ GRRMINGILR RLQNSDSINI A
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