| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4354 |
|---|
| Symbol | |
|---|
| ID | 6206765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5650186 |
|---|
| End bp | 5650803 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641694021 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001821226 |
|---|
| Protein GI | 182416160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.122481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG CCTCTAAGCC ACAATACACG GACCATTCGA TTCTCAGGCG GATCGAAAGT
GACCGCTCAG GCCGGGCTTT CTCGGCCGGG GATTTCGCCA CGTTGGGCAG CCCCGCCGCT
GTGCGCAAAG CATTGGAGCG TCTCACAAAA GCCGGCCGAC TGCGCCGCAT CCGTCGCGGC
TTCTACGACC GCCCCCGGTC TCATCCCCTC CTCGGCGAGA CGGCACCCGA TCCCATGCAA
CTCGTGCGGA GCGTCATGAA AAACACGGGC GCACAGTGGC AGGTTTCCGG CGCTTATGCG
GCCAACCAGC TTCACCTCAC GGAACAGGTT CCGGCTCGCA TCGTCGTCCT CACGAACGGC
GTGCCGCGAA AAATCGCGCT CGGCAAACTG ACGCTGGATT TTCGGCGCGC GGCCCCGCGC
AATCTCCTCG GGGCCGGGAA GTCTTCCGGC CTCGTGTTCC AAGCCCTTCG CTATCTCGGC
AAGGATCAGG TCACTCCCGC GGTCGTCGCG CGGCTGCAAC GTGAGGTCGA TCCGGCCACG
AAACAGGAAC TGGCGAAACT CGCGCCCAAA ATGGCGGCCT GGCTCCGCCC GTTCATTCAA
CAAATCACGG CCTCCTGA
|
|---|
| Protein sequence | MKRASKPQYT DHSILRRIES DRSGRAFSAG DFATLGSPAA VRKALERLTK AGRLRRIRRG
FYDRPRSHPL LGETAPDPMQ LVRSVMKNTG AQWQVSGAYA ANQLHLTEQV PARIVVLTNG
VPRKIALGKL TLDFRRAAPR NLLGAGKSSG LVFQALRYLG KDQVTPAVVA RLQREVDPAT
KQELAKLAPK MAAWLRPFIQ QITAS
|
|---|
| |