| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4319 |
|---|
| Symbol | |
|---|
| ID | 6205113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5602241 |
|---|
| End bp | 5602759 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641693986 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_001821191 |
|---|
| Protein GI | 182416125 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC CCGACACCGT TACCAACATC GTGGTCGCCG GACTCGGCGG CCAGGGCGTG
ATCAAGGCCT CCGATCTCAT CGCCGCCGCC GCGTTCGCCG CGGGACTCGA CGTGAAGAAA
AGCGAGATCC ACGGCATGAG CCAGCGCGGC GGCAGCGTCG CGAGCGACGT CCGCTTCGGC
CGGCGCGTGC TCAGCCCGAT GGTGCCCGTC GGCGAAGCCG ATTTCCTGCT CGTCGTCGCG
CCCGACCAGG TCGACAACAA CCGCTACGTG CTCCGGCCGG GCGGCGTGTT GCTTGAGCCA
TCGCTGCTCG ACGCCGTGAA ACTCGCGAGC CCTCGCACGC TCAACGTTGC GCTCGTCGGC
GCGCTCAGCG CCTTCCTGCC CTTCGACGCC GCGGTGTGGC GCGCGGCACT CGATGCGACG
CTCGCGTCGA AGATCCGCGC GATCAACGAC GCGGCCTTCG CGGCGGGGCG CACGCTCGGC
GAGCAGCTCG CCGCCACCCG CTCCGCCGCC GCAGGCTGA
|
|---|
| Protein sequence | MTTPDTVTNI VVAGLGGQGV IKASDLIAAA AFAAGLDVKK SEIHGMSQRG GSVASDVRFG
RRVLSPMVPV GEADFLLVVA PDQVDNNRYV LRPGGVLLEP SLLDAVKLAS PRTLNVALVG
ALSAFLPFDA AVWRAALDAT LASKIRAIND AAFAAGRTLG EQLAATRSAA AG
|
|---|
| |