Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4229 |
Symbol | |
ID | 6207744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5454785 |
End bp | 5456065 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641693897 |
Product | hypothetical protein |
Protein accession | YP_001821102 |
Protein GI | 182416036 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.527328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.405756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAAA AACTCGTTTC CCTACTCGGC GCCGGGGTGT TTGCCCTGAG CGCTTTGGCC GGCTCCCTCG CCGCGGCTGA GACCGTCAAG GTCGGCGTGC TGCATTCGCT CAGCGGCACC ATGGCGATCA GCGAAACCTC GCTGCGCGAT GTGCTGCTGT TCGCCTTCGA CGAGATCAAC GCGCAAGGCG GCGTGCTGGG CCGGCAGATC GAGCCGGTCG TCGTCGACGG CGCATCCAAC TGGCCGCTGT TCGCCGAAAA GGCGAAGCAG CTGCTGGAGC AGGACCAGGT CGCCGTCGTG TTCGGCTGCT GGACGTCCGT AAGCCGCAAG TCCGTGCTGC CGGTGTTCGA GAAAAACAAC GGGCTGCTGT TCTACCCCGT CCAATACGAG GGCGAGGAGG AAAGCCAGAA CGTCGCCTAC ACCGCCGAAG CGGTGAACCA GCAGGCGACG CCGGCGGTCG ACTACTATCT CGCCGAGGGC AAGACGAAGT TCTACCTGCT CGGTTCGGAT TACGTTTATC CGCAGACCAC CAATCTCGTG CTGCTCGAAT ATCTGCTGAG CAAGGGCGTG CCGCTCGAGA ACATCGGCGG TGGCTTCAAG CGCGACGAGT CGGGCCGAAT CATCTCCGCC GGCAAATACA CGCCGTTCGG CCACACCGAC TACCAGCAGA TCGTCGCCGA GATCAAACAG TTCGCCGCCT CCGGCGACGC CTGCGTCATC AGCACGCTGA ACGGCGACAC GAACGTTCCG TTCTTCAAGG AGTACGCCGC GGCGGGGCTG ACGTCCGACA CCTGCCCGGT GGTGTCGTTC TCGATTTCGG AGGATGAATT TCGCGGCCTG CCGGCGAAGC AGCTCGTCGG TCAGCTGGGC TGCTGGACGT ATTTCCAGTC GCTCGATACG CCGGCCAACA AGCAGTTCGT CGGCGCATTC CAAAAGTGGC TGGGCACGAC GAAGGTGCCG GGCATCGTGA AGGAGGGCCG CGTGACCTGC TCGCCGATGG TGCTGAGCTA CGCCGGCGTG CATCTCTGGA AGGCCTGCGT CGAAAAGGCG GGAACCTTCG ACGTCGACGC GGTGCGCGCC GCGTGGAAGA GCGGCGTGTC GTTCGACGGG CCGGGCGGCC GCGTGACGAC GCAGCCCAAC ATGCACCTCA CGAAAAACGT CTACATCGGC GAGACGCGCG CCGACGGCCA GTTCAAGATC GTGAAGTCGT TCGACAACGT CGTCGGCGAG CCGTGGCTCA AGGGCAAGTT CAAGGCCGCG GCCGTCGCGA CGGCCCAGTA G
|
Protein sequence | MTKKLVSLLG AGVFALSALA GSLAAAETVK VGVLHSLSGT MAISETSLRD VLLFAFDEIN AQGGVLGRQI EPVVVDGASN WPLFAEKAKQ LLEQDQVAVV FGCWTSVSRK SVLPVFEKNN GLLFYPVQYE GEEESQNVAY TAEAVNQQAT PAVDYYLAEG KTKFYLLGSD YVYPQTTNLV LLEYLLSKGV PLENIGGGFK RDESGRIISA GKYTPFGHTD YQQIVAEIKQ FAASGDACVI STLNGDTNVP FFKEYAAAGL TSDTCPVVSF SISEDEFRGL PAKQLVGQLG CWTYFQSLDT PANKQFVGAF QKWLGTTKVP GIVKEGRVTC SPMVLSYAGV HLWKACVEKA GTFDVDAVRA AWKSGVSFDG PGGRVTTQPN MHLTKNVYIG ETRADGQFKI VKSFDNVVGE PWLKGKFKAA AVATAQ
|
| |