Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4185 |
Symbol | |
ID | 6208335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5409396 |
End bp | 5411327 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641693853 |
Product | hypothetical protein |
Protein accession | YP_001821058 |
Protein GI | 182415992 |
COG category | [N] Cell motility |
COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG GCCGCAAAGC CCTCACGATC GCCCTGCTTT TTGTCGGGCT CGTGCTCGTC AACTATCTCG CGTCGTCGAT TCCCGCACGG CTCGATCTCA CCGCCGAATC GGTCTACTCG CTCTCGCCCG GCACCAAGGC GATGCTCGGC AAGATCGAGG AGCCGGTCAC GCTCGAGCTC TACTTCACGA AGAACGCGTC CGGCCTCCCG ATCGCCTACA AAAACTACGC CACGCGCGTG CAGGAGATGC TCCGGCAATA CGTGCGCGCC AGCGGCGGCA AGCTCCGGCT CGATGTCATC AACCCGCGGC CGGATACGCC CGAGGAGGAG CGCGCGACCG CCGCCGGACT CACGCCGCAG GTCGCGCAGA CCGGAGGCGA ACAGTTCTTC TTCGGACTCG TGGTGATCCA GGCGGATCAG CAGAAGACGA TCCCGGCGTT CACGCCGCAG CGCGAACAGT TCCTCGAATA CGATCTCTCC AAGCTGATCT ACAGCGTGCA GCAGTTCGAC AAGCCCAAGC TTGGCCTGCT CACCAGCCTG CCGCTGCTCG GCACCAGCCC GCAGGAGATG CAAATGATGA TGATGATGCG CCGGCAGCCG CAGCCCGGCC AGTTCATCGC GGAGGAATGG CGCGAATCGT TCGAACTCGT CACCGTCGAG CCGACCGCGA CCGAACTGCC CGGCAACCTC GACGCGCTCG CCGTCATTCA CCCGCAGAAT CTCTCGTCCA AGCTGCAGTT CGCGATCGAC CAGTTCCTAC TCGGCGGCAA GCCGGTGTTC CTCTGCCTTG ATCCGTCCTC ACAGTATTTC AAGCGCCAGA GCAATCCGCA GCAGATGATG ATGGGCGGCG GCGCGGCCAA CGTATCCAGC GATCTGCCCA CCCTGCTCGG CGGCTGGGGA CTCACCTACA ACGCACAGAA AGTCGTCGGC GATCCCGTCA ATGCCACGCA GGTTCAGACT CAGGGCGGCG GGCTCGCGCG TTACCCGATC TGGCTGAGCC TGCGGCAGGA AAACTTCAGC GCCACCTCGA TGGCCACCGC GCAGCTCAAG TCGATGCTCT TCATCGAGCC CGGCAGCGTC GCATTGAAGG AAGGCGCCGG CGTGACGTTC ACGCCGTTGG TGGAGACGTC CACGCAGGCC GGCGAGCTCG ACGGAATGAT GCTCCAGTTT GCGCAGCCCG ACGATCTCGC CCGTCAGCTC ACGCCCAGCG GCAAAAAGAC CATCGCCGCG CTCGTCACTG GCAAGTTCAA GAGTGCGTTC CCCAACGGCG CGCCGAAGGA CGAGCCCAAG CCGGACGACA AAAAGGACGC CGCCGCAAAA TCTGATGTAG CCGGGGTCGC TGACCCCGGC CCGGGCTCAA CGAGCCCGGC TACAACCCTG AAAGAGTCCA AAGGCACGTC GACGCTGCTC GTCGTCACCG ATACCGACTG GCTGTTCGAC GACTACAGCG TCCGCAAATT CAACTTCTTC GGCCAGACCG CCGCGGAACC ATTCAACGAC AATCTCGCGT TCGGCGCGAA CGCTGTCGAC TTCCTCGCCG GCTCGCAGGA TCTCGTCTCG ATTCGCGGCA AGGGTTCGTC AATCCGGCCG TTCACCGTCG TGCGACAGAT GGAAGTCGAG GCAAACAAGA AGTACCAGGA AAAGCTCACC TCGCTCGAGG CGCAGTTGTC CTCAGTGCAA ACCAAGCTCA GCGAACTGCA GGGCAAGAAG ACCGAAGGCA ATCGTCTCGT CGCCTCGCCC GAGGTCACGA AGGCAATCGA GGATTTCCAA AAGCAGTCCG CTGCGCTGCG CGGCGAGCGC CGGCAGATCC GGCGCGCCCT GCGCGAGGAT ATCGATGCGC TCGAAAACCG GCTGCTTGTG CTCAATCTCG TCGCATCCCC GCTGCTGGTG GTCGCCTTCG GCCTCTGGTT CTACCGCGCC CGCCGGAAAT AA
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Protein sequence | MKLGRKALTI ALLFVGLVLV NYLASSIPAR LDLTAESVYS LSPGTKAMLG KIEEPVTLEL YFTKNASGLP IAYKNYATRV QEMLRQYVRA SGGKLRLDVI NPRPDTPEEE RATAAGLTPQ VAQTGGEQFF FGLVVIQADQ QKTIPAFTPQ REQFLEYDLS KLIYSVQQFD KPKLGLLTSL PLLGTSPQEM QMMMMMRRQP QPGQFIAEEW RESFELVTVE PTATELPGNL DALAVIHPQN LSSKLQFAID QFLLGGKPVF LCLDPSSQYF KRQSNPQQMM MGGGAANVSS DLPTLLGGWG LTYNAQKVVG DPVNATQVQT QGGGLARYPI WLSLRQENFS ATSMATAQLK SMLFIEPGSV ALKEGAGVTF TPLVETSTQA GELDGMMLQF AQPDDLARQL TPSGKKTIAA LVTGKFKSAF PNGAPKDEPK PDDKKDAAAK SDVAGVADPG PGSTSPATTL KESKGTSTLL VVTDTDWLFD DYSVRKFNFF GQTAAEPFND NLAFGANAVD FLAGSQDLVS IRGKGSSIRP FTVVRQMEVE ANKKYQEKLT SLEAQLSSVQ TKLSELQGKK TEGNRLVASP EVTKAIEDFQ KQSAALRGER RQIRRALRED IDALENRLLV LNLVASPLLV VAFGLWFYRA RRK
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