| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4091 |
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| Symbol | |
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| ID | 6204616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5300765 |
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| End bp | 5301928 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693759 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001820965 |
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| Protein GI | 182415899 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00248715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.783031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCGA GACAGATGCG GACTTCCTTT CCAACCTGTT ACCGTGTTCC ACTCGTCGCG
CTCCGCGTCC CACCGCATGC TGGCATCGTG AATCCCGCTT CACGTCTCGC CGGCGCAGGC
CGGCCCGCTC TGCTGCTCGC GCTCGGCGTT CTGGCGCTGG CGCTCCACCC AGCGGTCGCG
CGACCGTTGC GCGTAGCCTA CACGCACTCG TTCGTCTGCG TTCCGCTGGG CATCGCCGAA
ATGCAGGGCT TCTGGCAGGA GGCCGGACTC CAGGTCGAAT TGCGCGGATA CCAGACCAGC
GTCGAGGTGG TGTCGGCGCT CCGCTCGGCG GAGGTGGATC TCGCTTTCGA CCAGATCGCG
ACTTGGGTCG ACGAAGCGGA GGCCGGAACG CCGCTGGTGA TTCTCGGTGA AACCGACTGG
TCGCTCGGCG GCGACAAGCT CCTGCTGCGT GACGGCGCCG ATCTGCGCAA TCTCCGCGGC
CGGCCCATTG CCGTCTGCCT GCGCGGCAGC GGGCAAATGC TGTTCCTGCG CGAGGCGCTC
AACCGCGCGA ATCTGAGTCT TTCCGAATTT CCGCTCGCCG AGGTGCCCGA ACAGGAGAAA
GCGCTGCAGT TGTTCGCAGA GGGAAAGCTC CACGCGGTCG TCTGCAACGA TCCCTGGGCT
TCCCGGCTCG AGCGTTCTGG AGCCCACACG CTGGCCACCA CCGCGGACAT TCCCGGCATC
GCCCCGGAAG GCTTCGCCGC CCGTCGCGGG CAGGTGGACG ACGCCACGTT GCAGCGTTTC
TTCGCCGTCT GGTTCCGCGC TGTCGCGTTC CTGCACGATC CGGCAAACGC CGGTGTCGTC
GCCGAAACCG CCTCCGTTTA TTCGTTCGCG GGCAGCGAGA CCATCACCGC GGCCGATGTC
GAGCGCTACG CGAGAACAAT GCCCGTGCAC GACGCCGCCA CCTCGCTGCG CCAGAACGAT
CTCGAGTCCG GCAACGTCCG CCAGCTGATC CAACGGCTCC GCGTGCTCCT GCGGTTGCAA
GGCCGGCAAG TCACCGAGTC GGACCTCGCC GCTCACTTTC ACCTCGAGCC GGTGCGGGCG
ACCGCGAGGT CGACCGCCGA CGCCGGGACC ATCGCTGCCG GCGCCGGGAC TTCTCGGAGT
TCCCCACTCG TCACCGACCG GTAA
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| Protein sequence | MAARQMRTSF PTCYRVPLVA LRVPPHAGIV NPASRLAGAG RPALLLALGV LALALHPAVA
RPLRVAYTHS FVCVPLGIAE MQGFWQEAGL QVELRGYQTS VEVVSALRSA EVDLAFDQIA
TWVDEAEAGT PLVILGETDW SLGGDKLLLR DGADLRNLRG RPIAVCLRGS GQMLFLREAL
NRANLSLSEF PLAEVPEQEK ALQLFAEGKL HAVVCNDPWA SRLERSGAHT LATTADIPGI
APEGFAARRG QVDDATLQRF FAVWFRAVAF LHDPANAGVV AETASVYSFA GSETITAADV
ERYARTMPVH DAATSLRQND LESGNVRQLI QRLRVLLRLQ GRQVTESDLA AHFHLEPVRA
TARSTADAGT IAAGAGTSRS SPLVTDR
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