Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3976 |
Symbol | |
ID | 6205550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5164704 |
End bp | 5166248 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641693644 |
Product | glycosyl transferase family protein |
Protein accession | YP_001820850 |
Protein GI | 182415784 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCG CCGCTGAATC GCTCCCGGCA GTTGCGCTCG CCCCGCTGCA GACGGTCTTC TGCCCGATCT GCGGCAGCGA TCGCGTTCAC TACGCGTTCT CGATCCGGCA CGTCCGGGTC CTGCAATGCG CCGACTGCAA GTTTACGGCG CGCACCGAAC CGACAACGCA GTTGCTCGAT GCCACCGGCG CGGCCGCAGC CGACCGCCTC GCCGGCACCA GCGGTGAATT GCACGCCTTG GTGCATCAAC TCCTCCCGGA GAAAAACCGT TCCACGCGGT TGCGGATCGC CGACTGGCGG CCGGACGGCA GTGTGACTCT CGTCGGGAAA GACACTCCGG CCCCCGAGGC CGAAGCAGCG CCGCCCGTGG TCGTTTCGAT CGGGCAACTT GACGCGTTTC AGGACCCGCT GCCGTCGCTC CGCGCGCTGC GCGCCCGGGT CGGCGCAACT CAACCGGTCG TATTTTTCTA TTCCGACATC CACCAAGACG GCGTTGAGGT GGGTTCGACG GAATGGGAGC GACTGGCGAG CCAGCGCAAT GCTTACATCG ATACGTCAAC GGCGCTGACC GTGCTCTATC GCGCCGGCTA TCGCTGCCTC GGCGTGCGCC GCCTCCGGCG GCGGGTTAGC TGGCAACACT TCGTAGCCCA CCCGCACGAT CACACCTTTG TCGGTCGCTG GCGCCGCCGG TTGCTGCTGC TGATCCCGGC CGCCGTACGC AACCGACTGC CCGCAACTGC CAAGACCGCC GAAACGGCCA TTCTCGCCGC CCCCCGCGTC CGTGAGACTC CGCTCGTCTC CGTGGTGGTG CCCGTGTTCA ACGAAGCTCC CACCGTCGCG AAAGTGCTCG ACTCGGTTCT CCGCGTCCAG CTGGCGGGTG CGGCGGTCGA AATCGTGATC GTGGAGAGCA ACTCGACCGA TGGTTCGCGG GAGATCGTCC AGCGCTACGC GCAACACCCC CGCGTCACCT GCATTTTTGA GGAGCGCCCC CAGGGCAAAG GACACGCCAC CCGGCTCGGG CTGGCGAAGG CGCAGGGCGA CGTGCTGCTG ATCCAGGATG CGGATCTCGA GTACGACATC GAAGACTATC TATCTCTCCT TAATCCGATC ATCCGCGGTC ACGAGGCCTT TGTCCTTGGC TCGCGACACG GAGGTCGGCA GCACTGGAAG CTGAGGCAGT TCAACAAGCC TTTTCTCGCC GCGTTCTACA ACCTGGCCCA CGTACTGGTG ACGGGTTACA TCAACCTCCT GTTCGGTCTG AACCTGCGGG ATCCGCAGAC CATGTTCAAG GTGTGTCGCC GCGATTGTGT CGAGGGGTTG GTGTTTCACG GGAACTACTT CAACTTCGAC TACGAACTGC TCCTCAAAGT GGTTCGCAAG GGCTACGCCC CCATCGAAGT ACCGGTCAAT TACCGCTCGC GCTCGCACGC CGAGGGCAAA AAAATCCGGA TGTGGCGCGA CGCTCCGCTT GGTCTCTGGA TGATTACCAA GCTCCGCCTC ACGCCGTTGC GACGGTTCCT TACGATCGGC GAACCGATCG AATGA
|
Protein sequence | MSIAAESLPA VALAPLQTVF CPICGSDRVH YAFSIRHVRV LQCADCKFTA RTEPTTQLLD ATGAAAADRL AGTSGELHAL VHQLLPEKNR STRLRIADWR PDGSVTLVGK DTPAPEAEAA PPVVVSIGQL DAFQDPLPSL RALRARVGAT QPVVFFYSDI HQDGVEVGST EWERLASQRN AYIDTSTALT VLYRAGYRCL GVRRLRRRVS WQHFVAHPHD HTFVGRWRRR LLLLIPAAVR NRLPATAKTA ETAILAAPRV RETPLVSVVV PVFNEAPTVA KVLDSVLRVQ LAGAAVEIVI VESNSTDGSR EIVQRYAQHP RVTCIFEERP QGKGHATRLG LAKAQGDVLL IQDADLEYDI EDYLSLLNPI IRGHEAFVLG SRHGGRQHWK LRQFNKPFLA AFYNLAHVLV TGYINLLFGL NLRDPQTMFK VCRRDCVEGL VFHGNYFNFD YELLLKVVRK GYAPIEVPVN YRSRSHAEGK KIRMWRDAPL GLWMITKLRL TPLRRFLTIG EPIE
|
| |