Gene Oter_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3976 
Symbol 
ID6205550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5164704 
End bp5166248 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content64% 
IMG OID641693644 
Productglycosyl transferase family protein 
Protein accessionYP_001820850 
Protein GI182415784 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG CCGCTGAATC GCTCCCGGCA GTTGCGCTCG CCCCGCTGCA GACGGTCTTC 
TGCCCGATCT GCGGCAGCGA TCGCGTTCAC TACGCGTTCT CGATCCGGCA CGTCCGGGTC
CTGCAATGCG CCGACTGCAA GTTTACGGCG CGCACCGAAC CGACAACGCA GTTGCTCGAT
GCCACCGGCG CGGCCGCAGC CGACCGCCTC GCCGGCACCA GCGGTGAATT GCACGCCTTG
GTGCATCAAC TCCTCCCGGA GAAAAACCGT TCCACGCGGT TGCGGATCGC CGACTGGCGG
CCGGACGGCA GTGTGACTCT CGTCGGGAAA GACACTCCGG CCCCCGAGGC CGAAGCAGCG
CCGCCCGTGG TCGTTTCGAT CGGGCAACTT GACGCGTTTC AGGACCCGCT GCCGTCGCTC
CGCGCGCTGC GCGCCCGGGT CGGCGCAACT CAACCGGTCG TATTTTTCTA TTCCGACATC
CACCAAGACG GCGTTGAGGT GGGTTCGACG GAATGGGAGC GACTGGCGAG CCAGCGCAAT
GCTTACATCG ATACGTCAAC GGCGCTGACC GTGCTCTATC GCGCCGGCTA TCGCTGCCTC
GGCGTGCGCC GCCTCCGGCG GCGGGTTAGC TGGCAACACT TCGTAGCCCA CCCGCACGAT
CACACCTTTG TCGGTCGCTG GCGCCGCCGG TTGCTGCTGC TGATCCCGGC CGCCGTACGC
AACCGACTGC CCGCAACTGC CAAGACCGCC GAAACGGCCA TTCTCGCCGC CCCCCGCGTC
CGTGAGACTC CGCTCGTCTC CGTGGTGGTG CCCGTGTTCA ACGAAGCTCC CACCGTCGCG
AAAGTGCTCG ACTCGGTTCT CCGCGTCCAG CTGGCGGGTG CGGCGGTCGA AATCGTGATC
GTGGAGAGCA ACTCGACCGA TGGTTCGCGG GAGATCGTCC AGCGCTACGC GCAACACCCC
CGCGTCACCT GCATTTTTGA GGAGCGCCCC CAGGGCAAAG GACACGCCAC CCGGCTCGGG
CTGGCGAAGG CGCAGGGCGA CGTGCTGCTG ATCCAGGATG CGGATCTCGA GTACGACATC
GAAGACTATC TATCTCTCCT TAATCCGATC ATCCGCGGTC ACGAGGCCTT TGTCCTTGGC
TCGCGACACG GAGGTCGGCA GCACTGGAAG CTGAGGCAGT TCAACAAGCC TTTTCTCGCC
GCGTTCTACA ACCTGGCCCA CGTACTGGTG ACGGGTTACA TCAACCTCCT GTTCGGTCTG
AACCTGCGGG ATCCGCAGAC CATGTTCAAG GTGTGTCGCC GCGATTGTGT CGAGGGGTTG
GTGTTTCACG GGAACTACTT CAACTTCGAC TACGAACTGC TCCTCAAAGT GGTTCGCAAG
GGCTACGCCC CCATCGAAGT ACCGGTCAAT TACCGCTCGC GCTCGCACGC CGAGGGCAAA
AAAATCCGGA TGTGGCGCGA CGCTCCGCTT GGTCTCTGGA TGATTACCAA GCTCCGCCTC
ACGCCGTTGC GACGGTTCCT TACGATCGGC GAACCGATCG AATGA
 
Protein sequence
MSIAAESLPA VALAPLQTVF CPICGSDRVH YAFSIRHVRV LQCADCKFTA RTEPTTQLLD 
ATGAAAADRL AGTSGELHAL VHQLLPEKNR STRLRIADWR PDGSVTLVGK DTPAPEAEAA
PPVVVSIGQL DAFQDPLPSL RALRARVGAT QPVVFFYSDI HQDGVEVGST EWERLASQRN
AYIDTSTALT VLYRAGYRCL GVRRLRRRVS WQHFVAHPHD HTFVGRWRRR LLLLIPAAVR
NRLPATAKTA ETAILAAPRV RETPLVSVVV PVFNEAPTVA KVLDSVLRVQ LAGAAVEIVI
VESNSTDGSR EIVQRYAQHP RVTCIFEERP QGKGHATRLG LAKAQGDVLL IQDADLEYDI
EDYLSLLNPI IRGHEAFVLG SRHGGRQHWK LRQFNKPFLA AFYNLAHVLV TGYINLLFGL
NLRDPQTMFK VCRRDCVEGL VFHGNYFNFD YELLLKVVRK GYAPIEVPVN YRSRSHAEGK
KIRMWRDAPL GLWMITKLRL TPLRRFLTIG EPIE