| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3899 |
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| Symbol | |
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| ID | 6207230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5062609 |
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| End bp | 5064387 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693567 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001820773 |
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| Protein GI | 182415707 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.345566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.118663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTCTCT CCATCGCCCT GCTCCTCGGC TTGATCGTCG TCGCGCTGGT GTTGTTTTCA
TTCGAGTGGG TGTCGAGCGA CGTGGTCGCG CTCGGGCTGC TCCTTGCCCT CATCCTTACC
GGACTGCTGC CCGTGAAGGA GGCCTTCGCC GGCTTCGGCA GCGAAACCGT GCTCATGATT
TTCGCGCTGC TCGTGATGAC CTCGGCCCTG GTGAAAACCG GCATGGTCGA TCTCGTGGCG
CAGGCGATTC TCCGTCACGC CGGCACGCGG TTCACCGCCC TGTTCGCCGT CATCCTGCTC
ACCGTGGCCG GCCTGAGCGC CTTCATCAGC AACACCGCGG CCGCCGCGCT GTTTCTGCCG
ATCGTCCTCG GCTTGGCCGC CAAGGCGAAG GTCTCGCCCT CCCGCCTGCT GATGCCGGTC
GCCTTCGCCT CGATCCTCAC CAGTTCGGTG ACGCTGATCA GCACCTCCAC CAATCTCGTG
GTCAGCGGAC TTATGACCCG GGCCGGGCTG GCGCCCTTGC GCATGTTTGA ACTCGCGCCG
GTCGGCATCC CGATCGCCGT CGTCGGCCTC GCCTACATGT TCTTCATCGG GCGCAAGCTC
ATCCCCGACC GCGCGCCCGC GAGCGGGTTG CTCGATCAAT TCGGCGTCCG TTCCTACATC
ACCGAGGTGC TCGTGCTGCC CGATTCGCCG CTCGTCCACA AAACCCTCGC CGAATCCAAC
CTCGGTCGGG ATCTGGACCT CGAGATCGTC CGGGTCCTGC GCAAGCCCGA CGTCTCGCTC
TGGCCCCGGC GCAACATGAC GCTGCGCGCC GGCGACGTCC TGCTCGTCCG CGGCGCGCGG
GAAGACGTGC TGAAGGTCAA GGATACCGCC GGCATCGAGA TCCGGCCCGA TGTGGAGCTG
TCGGATCCCG ATCTCCGCGC CGAAGACACG CAGCTCGTCG AGGCCCTGGT CGTGCCGCGC
TCGCCCATGG TGGGTCGCAC GCTCCGCCTG ATCGGCCTGC GCGAACGCTA TCGCGTGCAG
GTGCTCGCGA TCAACCGCCA TGGCCGCAAC CTGCTCGAGA AACTCAGCCA CACACTCCTG
CGCGTGGGCG ACGTGCTGCT GGTGCAGGGC CGGCCGCAGG ATCTCGCCCG CTTGTCCGAG
GACAACATGG TGAGCGTCCT CAATGCGGTG AACGAGCGCC GCATCGACCG GCCCCGGGCC
TGGCGCGCGA CGATCATCTT CGCCGGCTCG CTGGCGCTGG CCACCTTCAG TGTTCTGCCC
CTCCCGGTCG CCGTCCTGCT CGGCGCCTTC GCGATTTTCC TCACGCGCTG CATCTCCCCG
ACCGACGCGT ATCGCGACAT GGAGTGGCGT GCGGTCATCC TCATCGCCTG CATGCTCGCG
CTGGGCGAGG CGATGATGCG CACCGGCACC GCCACTTATC TGGCCCAGCA CGTCGCCACG
TGGACCGCCA ACTTCTCCCC GGGCTGGCTG CTCGGCGGAT TCTTCGTTCT CACCGTCGCG
CTCACCCAGC CCATGTCGAA CCAGGCCGCC GCCGCCGTCC TGTTGCCGAT CGCGGTCCAG
ACCGCGACGC ATGCCGGACT GAACCCGCGC GCGTTCGCGA TCATGATCGC GGTGGCCGCC
AGCTGTTCGT ATCTCACGCC ACTCGAACCG GCGTGCTTGA TGGTCTACGG TCCCGGGCAC
TATCGCTTCA TCGATTTCGT GCGGGTCGGC GCCCCGCTCA CTCTCCTCCT CTTCCTGATT
GCGCTGGTCC TCGTTCCGCG CACCTGGCCG TTGCTGTAA
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| Protein sequence | MTLSIALLLG LIVVALVLFS FEWVSSDVVA LGLLLALILT GLLPVKEAFA GFGSETVLMI
FALLVMTSAL VKTGMVDLVA QAILRHAGTR FTALFAVILL TVAGLSAFIS NTAAAALFLP
IVLGLAAKAK VSPSRLLMPV AFASILTSSV TLISTSTNLV VSGLMTRAGL APLRMFELAP
VGIPIAVVGL AYMFFIGRKL IPDRAPASGL LDQFGVRSYI TEVLVLPDSP LVHKTLAESN
LGRDLDLEIV RVLRKPDVSL WPRRNMTLRA GDVLLVRGAR EDVLKVKDTA GIEIRPDVEL
SDPDLRAEDT QLVEALVVPR SPMVGRTLRL IGLRERYRVQ VLAINRHGRN LLEKLSHTLL
RVGDVLLVQG RPQDLARLSE DNMVSVLNAV NERRIDRPRA WRATIIFAGS LALATFSVLP
LPVAVLLGAF AIFLTRCISP TDAYRDMEWR AVILIACMLA LGEAMMRTGT ATYLAQHVAT
WTANFSPGWL LGGFFVLTVA LTQPMSNQAA AAVLLPIAVQ TATHAGLNPR AFAIMIAVAA
SCSYLTPLEP ACLMVYGPGH YRFIDFVRVG APLTLLLFLI ALVLVPRTWP LL
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