| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3886 |
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| Symbol | |
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| ID | 6206090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5045721 |
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| End bp | 5047772 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693554 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001820760 |
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| Protein GI | 182415694 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0672592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA CCCTTCCCGG CGACGACGTG CGCCAGATCA TGTGGCGGTT TCAGCACCGT
TACGATCTGC AGATGTTGAT CCAATCCTCG CGCGGCGTCG CCCGCGGACT GGTGGCGCAC
CTCGTCGCGG AAGGCGCGCG CAACAGTCAC GAGTGGACCG CCGCGAAGCA GCAACTGCTC
AAAGCCTACG ACGAAGCCGG CATCACGACG TGCTTCATGG ATCCGCATCA GGGCGGATTC
ATCGAGGGCC CGAAGAATCT CGCGCTCGCG CTCGTCGCCC TCGAGCTCGC CTGGGTCGAC
GCCGGCGCCG CCACCGGCAG TCTCGCCGGC AACCTCGCTC TCTCCCCCAT CCACGAGCGC
GGCACCCAGG CCCAACGCGA CGTCTACATG AGCCGCTGCG TCCCGCCGCA GCCGGGCGAA
CAGAAGCAGG TCTGGCGCGG CGCGTTCAGT CTGACCGAGC CCTTGCCGTA TGTCGGCGTG
GAGACCGGCC TGCTCAGCGG CCGCGTGTCG ATCGCGGAAT GGCCGGACGG ACAGGAGCCG
CTGCTGCAGG TCGACAAGCG CGCGCGCTTC ATCACCAACA TGGGTTTCGC GAACTTCACG
ACGGCCGCCG TTGAGAGCGC CGATCCGCGC CTCAAGGGCA GCTGCATCGT GATCCTCGAG
GAGACCGATC CCGGCACGTA CGACCGCGGC GTGCCAACGC GCAAGATGGT GCACCAGCTG
TCGTCGACCA ACGATCCGGT GTTCAGCCTC AAGGTGCCCG CGAGCCGGAT CATCGGCGGC
TACACGATCA AGGATGGCGT GATCATTCCA AACTACAGCC ACGGTGAAAT CATCGAGGCC
GTGTTCCGCC GCACGCGCGT GACCGTCGGC ATCATGACCG CCGCCAAACT GCTCTCGGCA
GTCGAGCCGG TGATTCGCTA TCACCGCAAT CGGTTCCGCG GCGCCTCGAG CGTCAATCCT
GGCACGCCCC GGTTCGACCA GGGGCTGCAG CAGAAGGAAG ACTGCCTGCA ACGGCTCGTG
GATATCTGGG CCAACGGCGA GGCCGCGGCC TCGCTCGGGT TCGCCGCCGC CCGGCTCTTC
GACGAGCTCG ATCCGCTCGA AAAACTCAAG GACCAGAAGT TCGCCGAACA GAAAATCGCG
CCCGGCATGG CGCAGATGAA GGCGTTTCGG GCCATCGCGA AACAGGCACT CGAGTTCATC
GCGCTCGAGG CGCAGCCCGC GGCGACACGC GATGCCGCGC GTTACGAGGC GCTGAAAGCC
GACGCGCTCG TGCAGTATCT CATCCTCGAC TCGCAGGCCA ACGTCCTCTG CCCCGCGACC
AAGCTCTGGA ACACCGGCCA CGGCGCGAAC GTCATGCGCG AAGCGGTCAG CCTCGTCGGC
GGCTACGGCA TCACCGAAGA CTGTCCGGGT TTCCTCGGCC ACAAATGGAT GGATGCCCAG
CTCGAGGCCA CCTACGAAGG GCCGGAAGCG GTGCAGCGTC GCCAGCTTTC GGTGACGATG
ACCAACGAGG TTTTCCTCGG CTCGTGCCGT AGCTGGATCC GCGACCTGCA GCAGATCGCC
GCCACCCATC CCGGCATCGG TGCAAACTCA GTCGCCGCGG GCATGGAGCT GTGGCTCTGG
ACGCTCGAAC ATCTGCAGAA GGGCACCGAC GCGCTTGGCG CAAAACTCTT CTCGAGCAAT
CGGCAGGGCG TCACGTTTCC GCTCGCCGAT GCACTGTGCT GGCTCCTCGC CTCGCGCCAG
CAAATCCTCG ATGTGATCGA ACTCGAGACG AAGGGCCACG AAAGCGCCAC GCTCGCCGAT
GGCCTCAGCG GCTACGTCAA TTTCTTCACC GATCTTTGCG CGGTGCAGGC CGCGACGGCC
GCCGGCGAAG TCGGCCGGAT TTGCGCCGAA TTGGTCTACG GTTACGGCAG CGCGCCCGCG
GGAGCCGAGT CGTTCGTCGC ACTGCGTACG AAGCTCGACG CGAGCCTCGC GGGGGCCCGG
CTCGCCAAGG ACCGCGCCGC GGACGCCCTC ACCACCGTCA TGATTCCCGA GGCGCTCGAT
TATCCCGCGT AG
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| Protein sequence | MLKTLPGDDV RQIMWRFQHR YDLQMLIQSS RGVARGLVAH LVAEGARNSH EWTAAKQQLL
KAYDEAGITT CFMDPHQGGF IEGPKNLALA LVALELAWVD AGAATGSLAG NLALSPIHER
GTQAQRDVYM SRCVPPQPGE QKQVWRGAFS LTEPLPYVGV ETGLLSGRVS IAEWPDGQEP
LLQVDKRARF ITNMGFANFT TAAVESADPR LKGSCIVILE ETDPGTYDRG VPTRKMVHQL
SSTNDPVFSL KVPASRIIGG YTIKDGVIIP NYSHGEIIEA VFRRTRVTVG IMTAAKLLSA
VEPVIRYHRN RFRGASSVNP GTPRFDQGLQ QKEDCLQRLV DIWANGEAAA SLGFAAARLF
DELDPLEKLK DQKFAEQKIA PGMAQMKAFR AIAKQALEFI ALEAQPAATR DAARYEALKA
DALVQYLILD SQANVLCPAT KLWNTGHGAN VMREAVSLVG GYGITEDCPG FLGHKWMDAQ
LEATYEGPEA VQRRQLSVTM TNEVFLGSCR SWIRDLQQIA ATHPGIGANS VAAGMELWLW
TLEHLQKGTD ALGAKLFSSN RQGVTFPLAD ALCWLLASRQ QILDVIELET KGHESATLAD
GLSGYVNFFT DLCAVQAATA AGEVGRICAE LVYGYGSAPA GAESFVALRT KLDASLAGAR
LAKDRAADAL TTVMIPEALD YPA
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