| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3833 |
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| Symbol | |
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| ID | 6205732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4979965 |
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| End bp | 4981671 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693500 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001820707 |
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| Protein GI | 182415641 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.522953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG GCAAAATCCA GTCCCAGATT GTCGCGGAAC TCACGGCCAT GAGCCGGCTG
ACGGACGAGC AGCGGGAGAA GATTGGGGCG TTGCCCGGCG ACATGACGGG TGACGCGCTC
GAGAAGATGC TGCAGGACGA GTACCGGATC ACGCCGTTCC AGCTGCTCGT GGCGAAGGGC
CGCGCGTTCC GGCTGTCGCC GGTCAATGTC GCGCGGTTCA AGGTTCTGCC CGACACGTTC
GAGCGCATCC CGCAGGATTT CTGTCAGCAG AACCTCGTGC TGCCGGTGGG GCAGGTGGGC
GATTTCCTGC TGGTGGCGTT CGCAAATCCG TTCGAGATCA CGCTGCCCAC GAAGATCCAC
GAGATGACCG GCAAGAAGGT CATCCGGCTG CTCGCGCGCG AGAAGGACAT TCGCGACAAG
TTCGTCAAGA GCGCGGATCA GCAGCCCGCC GGCTTCGACG ATGTCGTCGA GAAGATCGGC
GAGGAGTATG GCGTCATCGC CGAGGCGGGC AGCGACGACG TGACAGAGGA ATCAGGTCCG
ATCATCCAGC TCGCGAACCG GATCATCGAG GACGCGTATT TCGCGGGCGC GAGCGACATT
CACGTCGAGC CGCAGGAAAA GGAGATGATG GTCCGCTATC GCGTGGACGG CATGTGTTCG
GAAAAGCTCC GGCTGCCGGC GCGCGTGGGG CCGGCGCTCG TCGCGCGGCT CAAGATCATG
TGCAACCTGG ACATCGCCGA ACGCCGGTTG CCGCAGGACG GCCGCATCAT CTTCAAGCAA
TACACGAAGA AAGGCCTCGA CCTCGACCTG CGCGTGTCGA CCGCGCCGTT GAACCACGGC
GAGGGCGTGG TGATGCGTAT TCTCGACAAG CAGAAGACGA CGCTCCCGCT GCCGATGCTC
GGATTCACGG AGGAAAATCT CGGCAAGTAT CGCGAGTGCA TCCGCCAGCC CTACGGCATG
ATCCTGCACT GCGGCCCGAC CGGCTCGGGT AAGTCGATGA CGCTCTACTC GGCGCTGAAC
GAGATCAACA CGCCGGACAT CGTGATCCGC ACCGCGGAGG ATCCGATCGA ATACACGCTG
CCCGGCCTGA ACCAGATGCA GATGCACCGG CAGATCGGGC TGACCTTCGC GTCGGCGCTG
CGCGCGTTCC TGCGGCAGGA TCCCGACGTG ATCCTGGTCG GTGAGATCCG CGACAAGGAG
ACCGCGGACA TCGCGGTCGA GGCCGCGCTG ACCGGTCACC TGCTGATCAG CACGCTGCAC
ACGAACGACG CGCCGAGCAC GGTGGCGCGG TTGACGGACA TGGGCATCGA GCCGTTCATG
ATTTCGTCGT CGCTGCTGTG CGTCTGCGCC CAGCGACTGA TGCGGCGCGT CTGCAAGACC
TGCCGCGTGC CTTACGTGCC GCAGGGTCGC GAGGATGAGA TTCTGCAAAA GGCGATCGGC
TGGAGCGGGC AGATTTTCAA GCCCAACCCC AAGGGCTGTC CGAAATGCAA CAGCACGGGC
TACAAGGGCC GTGTGGGTAT TCACGAGCTG ATGGTCACGA ACGAAGAGTT GATCGAAGGC
ATCAACAAAC AGCTCGAGAC GGCGGAGATC AAAAAGATCG CCGTGCGCGG CGGCATGAAA
ACGCTGCACC AGGACAGTCT GATCAAGGTG CGGGATGGCG TGACCACGAT GGAGGAGGCC
ATCGCGACGG TGCCGCCCGA TCTGTGA
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| Protein sequence | MALGKIQSQI VAELTAMSRL TDEQREKIGA LPGDMTGDAL EKMLQDEYRI TPFQLLVAKG
RAFRLSPVNV ARFKVLPDTF ERIPQDFCQQ NLVLPVGQVG DFLLVAFANP FEITLPTKIH
EMTGKKVIRL LAREKDIRDK FVKSADQQPA GFDDVVEKIG EEYGVIAEAG SDDVTEESGP
IIQLANRIIE DAYFAGASDI HVEPQEKEMM VRYRVDGMCS EKLRLPARVG PALVARLKIM
CNLDIAERRL PQDGRIIFKQ YTKKGLDLDL RVSTAPLNHG EGVVMRILDK QKTTLPLPML
GFTEENLGKY RECIRQPYGM ILHCGPTGSG KSMTLYSALN EINTPDIVIR TAEDPIEYTL
PGLNQMQMHR QIGLTFASAL RAFLRQDPDV ILVGEIRDKE TADIAVEAAL TGHLLISTLH
TNDAPSTVAR LTDMGIEPFM ISSSLLCVCA QRLMRRVCKT CRVPYVPQGR EDEILQKAIG
WSGQIFKPNP KGCPKCNSTG YKGRVGIHEL MVTNEELIEG INKQLETAEI KKIAVRGGMK
TLHQDSLIKV RDGVTTMEEA IATVPPDL
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