Gene Oter_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3786 
Symbol 
ID6206096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4918547 
End bp4920367 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content66% 
IMG OID641693454 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001820661 
Protein GI182415595 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTGC CATACCAGCG CTCACGCATG GCTGCCCCCG CCCCGCCTGC CCCGGCCGCG 
CTCCCGATCG CTGCGAAAGT AGACGGTGAG ATGACGCGGC TTTTGTATCG ATCCGCGGGT
TTCGGGCTGT TTTCCAACTT CATTCTCGCC GCGATTCTCG TCGTCGGCAC GAGCCGATCG
CTGTCCTGGT CGCTCCACAT TCCCTGGCTG GCGGCCATTG TGCTCGTTTC CGGTGCGCGG
CTGCGGCTCA ACCTCCGGTT TCGCCGCGAG CAACCAAGAC TCGAAACGCT GCCCCGCTGG
CGCCGTGCGT TCGTCGTCGG CGTCATCGCG TCGGGGATCG TCTGGGGTAT TGCCGGCTGG
GTGTATTTCG GCGCCAGCGA CAGCACCGGC CGCCTCCTGC TGGCGATGAT TCTCATGGGG
CTCAATGCCG GCGCCGCGCG TTCGCTGGCT TCGGTGCCCG CTTCCTACCG GCTCTACGTG
CTCACCACGC TCGGACCGAT TCTCCTGCGG TTCGCCACGT GGCCCGACGG CGGCTGGACC
CTCGCGCTCA TCACCATCAC CTACGCTTTG TTTCTCATCA ACACGATGCG GCTGCACCAC
GGCGACCTCC GGCGACTCTG GCAGCTCATC TTCGAGAACG AGGAATTGGT CGGCACCTTG
AGCCAGGCGA AGGAGCGCGC CGACGCGGCG AACCGCGCGA AGAGCGATTT TCTCGCCACG
ATGAGCCACG AGATCCGCAC GCCGATGAAC GGCATCATGG GCATGCTGCA GGTGCTGCAC
GGCTCGTCGC TCACGGTGGA GCAGCGCGCC CAGGTCGAGA TCGCCGGCAA CTCCGCCGAG
AGCCTGATGC GGCTGCTCAA CGACATTCTC GATTTCTCCA AAATCGAGAG CGGCAAGCTC
GAGTTCGAAT CCGTTTCCTT CGACCTGAAG GCCGCGCTCC ACGACGTCGT GTCGCTGCTG
CGCCCCCGCG CCGCCGAGAA AGGCCTCGCG CTCGAGCTGC ACCTGCCGGA CAACCTGCCC
GATCACGTGA TCGGCGATTC GGTGCGGCTG AAACAGGTGC TCCTCAATCT GACCGGCAAC
GCCATCAAGT TCACCGAGCA GGGCGAAGTG GCCCTCCGGG TCCGGGTCAG CCAGCGCGAC
ACCACGTCGG CGCGGGTGGG ATTCAGTGTG CGCGACACCG GGATCGGCAT GGACGACGCC
ACGCGGCAAA AGCTGTTTCA GCTGTTCAGC CAGGGAGACA GCTCGATGAA CCGGCGTTTC
GGCGGCACGG GGCTCGGACT CGCGATCTCA CAGCGATTGG CGGAGCACAT GGGCGGAAAG
ATCGAAGTGC GCAGCAGCCC GGGCCAAGGC GCCGAATTCT CCTTCGAGCT TAGCTTCGCC
ACCGACGACG CGAGGCCGCC GCGGCACGTC ACCCCGCCGG TATTCCACCG GCCCGTCGCC
GGACGACTGC TCGTGGTGGA AGACGATCGC ATCAATCAGC AAGTGATCCA TCTGCTGCTG
GCGAAGCTCG GGCTCGAGAG CGTGATTCTC AGCGACGGCG CCGCCGCCGT CGCCGCTGCC
GCGCAGGAAA ACTGGGACGC CGTCATCATG GACTGCCAGT TGCCGGGCAT GGACGGATTC
GAGGCGACGC GGCAGATCCG CCGCAAGCTG GCGGGTCGGC CGCTGCCGAT CATCGCGCTC
ACCGCCAACG CCCGACCGGA GGATCGCGCC GCGTGCGTCG CGGCCGGGAT GGACGACTTT
CTCACCAAGC CCGTACGGCA GGACGAGTTG CGTGCCTGTT TGGGGAAGTG GCTGCAACGG
CCGGCGGCGG AGTCGCGATA A
 
Protein sequence
MELPYQRSRM AAPAPPAPAA LPIAAKVDGE MTRLLYRSAG FGLFSNFILA AILVVGTSRS 
LSWSLHIPWL AAIVLVSGAR LRLNLRFRRE QPRLETLPRW RRAFVVGVIA SGIVWGIAGW
VYFGASDSTG RLLLAMILMG LNAGAARSLA SVPASYRLYV LTTLGPILLR FATWPDGGWT
LALITITYAL FLINTMRLHH GDLRRLWQLI FENEELVGTL SQAKERADAA NRAKSDFLAT
MSHEIRTPMN GIMGMLQVLH GSSLTVEQRA QVEIAGNSAE SLMRLLNDIL DFSKIESGKL
EFESVSFDLK AALHDVVSLL RPRAAEKGLA LELHLPDNLP DHVIGDSVRL KQVLLNLTGN
AIKFTEQGEV ALRVRVSQRD TTSARVGFSV RDTGIGMDDA TRQKLFQLFS QGDSSMNRRF
GGTGLGLAIS QRLAEHMGGK IEVRSSPGQG AEFSFELSFA TDDARPPRHV TPPVFHRPVA
GRLLVVEDDR INQQVIHLLL AKLGLESVIL SDGAAAVAAA AQENWDAVIM DCQLPGMDGF
EATRQIRRKL AGRPLPIIAL TANARPEDRA ACVAAGMDDF LTKPVRQDEL RACLGKWLQR
PAAESR