Gene Oter_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3721 
Symbol 
ID6206305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4839436 
End bp4840464 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID641693387 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001820596 
Protein GI182415530 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.280211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG GTGACGTATC CGCGGAAATC CTCCGCGACG AGCATCTCAC GCAAGCCGCC 
GCCGAATGGT TGATCCGGCG CGGCGCCGGG CTGAACTCTG CCGAGGCCGC CGAGTTCGCC
GCGTGGCACG CGGACCCGCG GCACGCGATT GCTTTTGCCC GCGTGGAGAA AACGCAGCAC
CTGCTTTTCC GGCTTCCACA GGCCCCGACC GCCGCGGCCT TGATGGCCGA GGCCGATTCA
CTGATGCGGC GCGCCCGCCC TGCGAAACCC TCGCGGCTTC ACGGCTGGCC CACTTACGTC
ACGCTGGCTG CGGCGGCCTG CGTCACCGTC GCACTCTGGC TCGCCTGGCC GACGCTGCGA
CCCGAACGGG ATATTTTCGC CACGCTGGCC GGACAACGGC AGTCGGTGAC ACTCAACGAC
GGCTCCACGC TCGTCCTCAA CGGCGACTCT GAAGTACAGG TCGCCTTTGC CGCCGCCGAA
CGCCGCGTTC AGCTCCACCG CGGCGAGGCG CACTTCTTCG TCGCGAAGGA TCCGGCGCGG
CCGTTCTTCG TGAGCGCCGA CAAGGTGACG ATCCGCGCGG TGGGCACCGC GTTCAACGTA
CGCCGCGAAG CCAACGCCAT CGACGTGCTG GTCACCGAGG GCAAGGTCCA GGTGACGCAC
GGTGTGACCG GCGCGAACGG CGCTGCGGCC CTGCCGATCT ATCTGGTGAG CGGCGAAAGC
GTGCACATCG ACACGCTCTC GAGCGCAATC GCCGTGGCCT CGGACGCCGC ACCCGCCGGC
GAAAAATTGC TCCACTCCGC CCCGCGGCTC GTCTTCAGCG ACACACCGCT CGGTGAGGTC
GTCGCCCTGT TCAATCGCTA CAATCAGCTC CAGATCGAGA TCGCGGAGCC CGAGCTCGCG
CTTCGCGCCG TGCGCGGGAA CTTCGACGCG GACAACGCGG AGTCGTTCAT TGCGCTGATG
GAACGCTCCG GCGACGCGCA GATCGAGCGC GTCTCCCCGA CCAAGGTCCG GCTGCACAAG
GCGCCGTGA
 
Protein sequence
MNPGDVSAEI LRDEHLTQAA AEWLIRRGAG LNSAEAAEFA AWHADPRHAI AFARVEKTQH 
LLFRLPQAPT AAALMAEADS LMRRARPAKP SRLHGWPTYV TLAAAACVTV ALWLAWPTLR
PERDIFATLA GQRQSVTLND GSTLVLNGDS EVQVAFAAAE RRVQLHRGEA HFFVAKDPAR
PFFVSADKVT IRAVGTAFNV RREANAIDVL VTEGKVQVTH GVTGANGAAA LPIYLVSGES
VHIDTLSSAI AVASDAAPAG EKLLHSAPRL VFSDTPLGEV VALFNRYNQL QIEIAEPELA
LRAVRGNFDA DNAESFIALM ERSGDAQIER VSPTKVRLHK AP