| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3720 |
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| Symbol | |
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| ID | 6207208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4838889 |
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| End bp | 4839449 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641693386 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001820595 |
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| Protein GI | 182415529 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.344923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATCGC ACGAAACCGA GCACGCGCGC TGGTTCGCCG TGGAAGTGCA ACCCCACGAA
CCGGCCCTCC GCGCTTACCT GCAGTCTCAT TTTCCGCTGC TGCAGGATCC CGACGATGTG
ATCCAGGAGA CCTACAAGCG ACTGTGGGTC GAGCAAACCG CCGGCCGTAT CCGCCACGTG
CGGGCGTTCA TGTTCACCGC GGCTCGCAAC GTCGCGCTCG ATCTCTTCCG GCGCACGCGC
AAGATTCAGT TCGAACCACT CACCCATCCC GAGGTGATCG ACGTCGTAAA GGAGGCGCCG
AGCACGGCGG AGGCCCTCAG TCAGCAACAG GAGCTCGAAA TTCTGGCCCA AGCGGTGCAA
AAGCTGCCGG ATCGGTGTCG CCAAGTCATG CTGCTGCGCT ATCTCAAGGG TTGCTCCTAC
AAGGAAATCT CCGCCCTCCT GGATATCTCC CCGGAGACGG TGAAGACCCA TCTCGCTAAA
GGAATCCAAC AGTGCACCGA TCATTTCGCC GCGTGTGGCT TGCTCAACGA GCGGAGGTTC
TTCTCCCATG AACCCCGGTG A
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| Protein sequence | MSSHETEHAR WFAVEVQPHE PALRAYLQSH FPLLQDPDDV IQETYKRLWV EQTAGRIRHV
RAFMFTAARN VALDLFRRTR KIQFEPLTHP EVIDVVKEAP STAEALSQQQ ELEILAQAVQ
KLPDRCRQVM LLRYLKGCSY KEISALLDIS PETVKTHLAK GIQQCTDHFA ACGLLNERRF
FSHEPR
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