Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3699 |
Symbol | |
ID | 6204677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4807494 |
End bp | 4808291 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693365 |
Product | Cof-like hydrolase |
Protein accession | YP_001820574 |
Protein GI | 182415508 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.143093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGG TCGTGCTGGA TCTGGACGGG ACGCTGCTCC GCAGCGACAA GACGATCTCG CAGCGCGCGA GCGCGGTGTT GCGCCGGTTG AAGGACATGG GTCAGACGCT CGTCTTCGCG ACGGCGCGGC CGCCGCGCGC GGTGAAGGCG GTGCTGCCGG CGGAGTTTGC GATGGACTAT CTCGTCTGCT ACAACGGCGC GCTGGTGCTG CAGCAGGGCT GCGTGCGGAG CGAATGCGCA ATTCCCGCGG CCGACGTGCG TCGGATCTTC ACCCGGCTGG AGAAGAACGC GCCCTGCACC GCCTGCGGTT TCGAACATGA AGACCAGCTT TTCGTGCGCG GGAGTTTCGA CCGGCATTTT TCGACGGAGT TTTGCACACC CATGCTACCG GGGGGGCCGT GTGAGCGGAG CTCGCCGAAG GTGCTCGTCG ATTTGGCAGG ACTGGATTTC GCGGCGTTCC TGGGCGTGCT ACCGGCGAGC TGTTACGCGC TGTGCACCGA CGGTGGCGGA CTGTGCCAAA TCATGCCGGC GGGCGCGACG AAAGAGAGCG GTGTGGCCGC AGTGCTGCGC GAGCTCGGCG TCGGTTTCGA GCACGTCGTG TGCTTTGGCG ACGATCACAA CGACGTGCCG CTGTTCCAGC GCGCCGGCTG CGCCGTGGCG ATGGCGAATG CGGTGCCGGA ATTGAAAGCG ATCGCGCATG CGGTGACCGG CTCCAACGAC GAGGACGGCG TAGCGGAGTT TCTCGAGCAG CGGTATGCGG TGAACGGCGT TTCGGAGTGG TGTAGCCCCG CTCGTTGA
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Protein sequence | MDVVVLDLDG TLLRSDKTIS QRASAVLRRL KDMGQTLVFA TARPPRAVKA VLPAEFAMDY LVCYNGALVL QQGCVRSECA IPAADVRRIF TRLEKNAPCT ACGFEHEDQL FVRGSFDRHF STEFCTPMLP GGPCERSSPK VLVDLAGLDF AAFLGVLPAS CYALCTDGGG LCQIMPAGAT KESGVAAVLR ELGVGFEHVV CFGDDHNDVP LFQRAGCAVA MANAVPELKA IAHAVTGSND EDGVAEFLEQ RYAVNGVSEW CSPAR
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