| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3680 |
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| Symbol | |
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| ID | 6207572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4784026 |
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| End bp | 4785555 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693348 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001820557 |
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| Protein GI | 182415491 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0782936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.503756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCG CCGTCGAAGC CTCCTGGAAC GAAGCCCATC ACCGTGCGGG CGCCGCCTAC
GCCGCCGCGC GCCGCCGCGT CACGATTGAC CCGATCACGC GGCTCGAGGG TCACGGCAAG
ATCGATGTGT TCCTCGACGA GGCGGGCGAC GTCGAGCGCG CGTATCTCCA GATACCGGAG
CTGCGCGGTT TTGAGGTTTT CAGTCTCGGC CGTCCCGCCG AGGACATGCC CCAGATCACG
AGCCGGATTT GCGGCGTCTG TCCGACCGCG CACCATATGG CGGCCACGAA GGCGCTCGAC
GATCTTTACC ATGTCGAGCC GACGCCCGCG GCGCGGAAGA TCCGCGAACT GGTCTACAAC
GCGTTCATGA TCGAGGACCA CTCGCTGCAC GTTTACCTGC TGGGCGGTCC GGACTTCATC
GTCGGCCCCC AGGCGCCCGC GGCCGAGCGC AACGTCATCG GCGTCATCAA CAAAGTCGGA
CTCGAGGTCG GCAAGCGCGT GATCGCCACC CGCCGCCGGC TCCGCGAGCT GATCGCTTAC
TTCGGCGGCA AGGTCATCCA TCCCGTGCTC GGACTGCCCG GCGGCGTCGC GAAGGGCCTC
AAACCGGAGG ATCTCGCCAC GTTCCAGGCG CTGGCCGCCG ACACACTGGA TTTCGCCCAG
TTCACCTTGC AGGTGTTCCG CGACCTCGTG ATCGCCAACC AGGACTACGT GAAGCTGATC
ACATCCGATC CATACACCCA CCGCACCTAC TACATGGGAC TCGTCGATGC GGCCAACAAG
GTGGCTTTCT ACGACGGGCA GATCCGCGTC GTCGACGCCG ACGGCCGGGA ATACGCAAAG
TTTCCGGTGC AACGCTACCG CGAGTTCATC GCCGAGCACG TCGAGCCGTG GAGCTACGTG
AAATTCTGTT ATCTGAAGCC GCTCGGCTGG CATGGCTTCG AGGAAGGCCC GGCCAGCAGC
ATCTACGCGG TCGCGCCGCT GGCGCGACTG AACGTCGCCG ACGGCATGGC CACGCCGCTC
GCACAGAAAG CCTACGACGA GTATTTCTCC GCTCTCGGCG GCAAACCGGT GCACCACACG
CTCGCCAATC ACTGGGCGCG CGTCGTGGAG ATCCTCGCCG CCGCCGAACG GATGGTCGAG
CTGGTCAGCG ATCCCGAGAT TCTCAGCACC GACCTGCGGA CGATCCCCAC CGCGAAGCCC
ACCGTTGGCA TCGGCGTCGT CGAGGCGCCG CGCGGCACGC TGTTCCACCA CTACGAGACC
GACGAACGCG GGCTGATCAC GCTCGCGAAC CTGATCGTCG CCACCCAGAA CAACGCCGCG
CGCATCGCGA TGAGCGTCGA CCGGGCGGCG AAGAGTCTGA TCAAGCAGGG CCAGGTTTCC
GACGGGCTGA TGAACATGAT CGAGATGGCG TTCCGCGCCT ACGATCCCTG CTTCGGCTGC
GCCACGCACG CGCTGCCCGG CCACGTTCCG CTCAAGATCA ATCTCTACAA TCCCCAACGG
CAACTCGTCC GCCAGCTCGT GCAGCAATGA
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| Protein sequence | MNPAVEASWN EAHHRAGAAY AAARRRVTID PITRLEGHGK IDVFLDEAGD VERAYLQIPE
LRGFEVFSLG RPAEDMPQIT SRICGVCPTA HHMAATKALD DLYHVEPTPA ARKIRELVYN
AFMIEDHSLH VYLLGGPDFI VGPQAPAAER NVIGVINKVG LEVGKRVIAT RRRLRELIAY
FGGKVIHPVL GLPGGVAKGL KPEDLATFQA LAADTLDFAQ FTLQVFRDLV IANQDYVKLI
TSDPYTHRTY YMGLVDAANK VAFYDGQIRV VDADGREYAK FPVQRYREFI AEHVEPWSYV
KFCYLKPLGW HGFEEGPASS IYAVAPLARL NVADGMATPL AQKAYDEYFS ALGGKPVHHT
LANHWARVVE ILAAAERMVE LVSDPEILST DLRTIPTAKP TVGIGVVEAP RGTLFHHYET
DERGLITLAN LIVATQNNAA RIAMSVDRAA KSLIKQGQVS DGLMNMIEMA FRAYDPCFGC
ATHALPGHVP LKINLYNPQR QLVRQLVQQ
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