| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3677 |
|---|
| Symbol | |
|---|
| ID | 6207284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4780440 |
|---|
| End bp | 4782437 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641693345 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001820554 |
|---|
| Protein GI | 182415488 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.667385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.188485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCGA ACTGCTGCAA CGGGGATATC CGCATCGGCT TCTACATCTG CCACTGCGGA
CACAACATCG GCGCCGTGGT CGACTGCCCC GCCGTCGCTC AGGCGGTCGC GAAGCTGCCG
GGCGTGGTGG TCTCTCGGGA TTACAAATAC ATGTGCTCGG ATCCGGGGCA GGAGTTGATC
CAGCAGGACA TTCGCGAGCA TCACCTCACG CGCGTCGTCG TCGCCTCGTG CTCGCCGCTG
TTGCACGAAC ACACGTTCCG CCACGCCGTC GCCGCCGGCG GACTGAATCC GTTCCACTTC
CAAATGGTGA ACATCCGCGA GCACGACTCG TGGGTGCACA CCGATCGCGC GGCGGCGACC
GCGAAGGCCA AGGCCCTCGC CCGTGCCGCG ATCGAGCGCG TGCGGTTTCA CCGTCCGCTC
GAAACCACCC GCGTGCCGAT CAACCCCGAC GTGCTCGTCG TCGGCGGCGG CATCTCCGGC
ATCCATGCCG CGCTCACGCT CGGCAACGCG AACAAGCACG TTTACCTCGT AGAGCGCGAG
CCGTCAATCG GCGGCCACAT GGCGAAGTTC GACAAGACCT TCCCCACCCT CGATTGCGCC
GCCTGCATCC TGACCCCCAA GATGTCCGCG GTTCGCGCCC ACGAGAACAT CACGCTCTGG
ACCTACTCCG AGATCGTGAA GGTCGAGGGC TACGTCGGGA ACTACACCGT GACAGTCCGC
CGCAAGCCGC GTTACATCGA CGAGGAGCTC TGCGTCGGCT GCCAGGAGTG CATCAAGACG
TGCATCTTCA AGGACGGGAA GTTCCCCGAC GAGTTCAACG TCGGGCTCAG CAAGCGGAAA
CCGATCTACA TCCCGTTCCC GCAGGCGGTG CCGCAGGTCG TCGTGATCGA TCCCGAGCGC
TGTCTCCAAC TCAAGACCGG CAAGTGCAAG ATGACCTGCC TCGACGCCTG CACCGACCGC
AAGGCGATCA ACTTCGAGCA GATGGAGCGG CTGGAAACGA TCAAGGTGGG CAACATCATC
GTCGCGACCG GGTTCAAGCT CTTCGATGCG AAACGCATCC CGCAATACGG CTACGGCGCC
TACCCGAACG TCGTCACCTC GCTCGAACTC GAGCGGCTGG TGACCAGCTC CGGTCCGACC
GGCGGCGAGA TTCTGCTCAA GAACGGCCAG CCGCCGAAAT CCGTCGCGTT CATCCTCTGC
GTCGGCTCGC GCGATTTTCG CACCAACCGC TGGTGCTCGC GCACCTGCTG CATGCATTCG
ATGAAGCTCG CCCAGTTAGT CCGCGAGCAC ACCGACGCCG ACGTCACCGT TTTCTACATG
GACATCCGCG CGCCCGGTAA GGGCTGCGAA GAGTTTTACG ACAAGTCGCT CCGCGACGGC
ATCCAGTTTG TCCGCGGCCG CGTGGCCGAG GTCACCGACT GGGCGCTCGT GCCCGAGGAG
GAAGGCAAGC TGGTGATCCG CGCCGAGGAT ACCCTCGCCG GACTCGTTCG CCGGATCCCG
GTCGACATGA TCGTGCTCGC CGTCGGCATG GAGCCGCAAA GCGACGCGCA GGAGGTCCGC
CGGCTGTTCA ACATGAGCTG CGGCACCGAG GGCTGGTTTT TGGAAAAGCA CCCGAAGCTC
GCGCCGGTGA GCACGTTCAC CGACGGCGTG TTCATCGCCG GCTGCTGCCA GGGGCCGAAG
GACATTCCCG ACAGCATCGC GCAGGCGGGC GCCGCCGCCG CCGAGGCGCT GGCGCTCATC
GACCGGGGTT ACATCGAGCA GGAGCCGAAT ACCGCCTATA TCGCCGCCGA GGAATGCTCC
GGCTGTAAGT CCTGCATCGG ACTGTGTCCG TATACTGCGA TCACCTTCGA CGAGACCAAA
CAGGTCGCCT CGATCAACGC CGCGCTCTGC AAAGGCTGCG GCACCTGCGT GGCGGCATGC
CCCAGTGGCT CGATCCACCA AAACCTCTTC GAAGACCAGC AGGTCTTCAG CGAAATCGCC
GGAGTCTTGG CGGACTAG
|
|---|
| Protein sequence | MTSNCCNGDI RIGFYICHCG HNIGAVVDCP AVAQAVAKLP GVVVSRDYKY MCSDPGQELI
QQDIREHHLT RVVVASCSPL LHEHTFRHAV AAGGLNPFHF QMVNIREHDS WVHTDRAAAT
AKAKALARAA IERVRFHRPL ETTRVPINPD VLVVGGGISG IHAALTLGNA NKHVYLVERE
PSIGGHMAKF DKTFPTLDCA ACILTPKMSA VRAHENITLW TYSEIVKVEG YVGNYTVTVR
RKPRYIDEEL CVGCQECIKT CIFKDGKFPD EFNVGLSKRK PIYIPFPQAV PQVVVIDPER
CLQLKTGKCK MTCLDACTDR KAINFEQMER LETIKVGNII VATGFKLFDA KRIPQYGYGA
YPNVVTSLEL ERLVTSSGPT GGEILLKNGQ PPKSVAFILC VGSRDFRTNR WCSRTCCMHS
MKLAQLVREH TDADVTVFYM DIRAPGKGCE EFYDKSLRDG IQFVRGRVAE VTDWALVPEE
EGKLVIRAED TLAGLVRRIP VDMIVLAVGM EPQSDAQEVR RLFNMSCGTE GWFLEKHPKL
APVSTFTDGV FIAGCCQGPK DIPDSIAQAG AAAAEALALI DRGYIEQEPN TAYIAAEECS
GCKSCIGLCP YTAITFDETK QVASINAALC KGCGTCVAAC PSGSIHQNLF EDQQVFSEIA
GVLAD
|
|---|
| |