Gene Oter_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3539 
Symbol 
ID6204503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4608907 
End bp4610451 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content69% 
IMG OID641693207 
Producthypothetical protein 
Protein accessionYP_001820416 
Protein GI182415350 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.294562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGC CACGAATAGG CGCGCCACTT GAGCCGAGCC AGGCGCTCCA CCCGCGCCTG 
CATCGTCGCT TCCCGTTTGA CCCGCCGCCC GCAGCTCGCT TGCTCGGCGG CGTGAGAACT
GTGACCGCGC TGCTGTTTTC GTGCTGCCTC GCCGTGTGTC CGGCTGCGGC GCTCGGCGCG
CCTGAAATTC TCCTGATCGC CGGCGCGCCC AGTCACGGCC CCGGCGAACA TCGGTTCCCC
GCCGGTTGCA CCCTGCTCGC TGACGCCCTC AACGAAAGCC CGCACCTCGT TCACGCCACC
GCGGTCGACG CCTGGCCGGC GCCCGCGCGG CTCGCCGCCG CCGACGTGCT GGTGATTTTT
TCCGACGGAC TTGAACGCCA TGTTGCACGC GAACACCTCG CCGAGCTCCG CCAACACGTC
GCCGCGGGCA AGGGGCTGGC CGTGCTCCAT TTCGCGCTCG AGCCGAGCCC GGGCCCGCTC
GCTGACTTCC TGCTGGAGAA CGTCGGCGGC CGATTCGAGC CCGACTGGTC GGTGAATCCG
GTCTGGAAAC TCGAGCATCC CATTGTCGGC TCACACGAGG TCACGCGCGG CGTGATGCCG
TTCTCGCTCG AAGACGAATG GTATTTCCAC CTGCGGTTTC GGCCTGAGAT CGTTCCCGTG
TTGCAGGCGC ATCCGCCGGT GGACGTCCTC GGCGAAGACG GCCCGCGCTC GGGCAATCCC
ACCGTACGTG CGGCGCTCAC CGCCGGCGAA CCGCAAACTC TCGCCTGGGT GTTCGAGCAA
AACGGCCGCC GCGCATTCGG CTTCACCGGC GGACACTTCC ATCGCAATTG GGCCGACGAA
GCCTTTCGTC GACTGGTCTT GAACGGGATC GTCTGGACGG CGCACGCCGC GGTCCCGCCC
GGCGGCGTCA CCTCGAGTGC CCCAGCGCTT CCCCGCTTCG CCACGATCGA CGAGGCGATT
GCGCGCGACG ACCTGGCCGA CGTTCAGCGT CATCTCGCGC TCAATCCGAC GCTCGCCCGT
CACGGCGCCA ACGCCGCGCT TGCACCCCTG CACCAGGCGA TTCTGCGCAA TCGGACCGCG
ATCGCGCTGC TCCTGCTCGA GGCCGGCGCG GACGCCAACG CGCCGGACCG CAGCCGCCGG
ACCCCGTTGC ACCTCGCCGT CGAACGCGAC AATCTCCCGA TCCTCGAAGC GCTGCTCGCC
CGTGGCGCGC GACCGAGCGA ACGCGACCGG ATCGGCTGGA CGCCCCTGCA CCATGCCGCC
GCCAAGGACC GCCTCGATCT CGCCCGCGCG CTGCTGAAAT CCGGCGCCGA TCCGATGACA
CTCAGCGATG GCGGCGGCAC GCCGTTGCAC GAAGCCGCCG CCAGCGGCAG CGCGGAGATG
GTGCGTCTGT TGCTCGATGC CGGCGTCGAC GCCAGCGTGG TTTCGAAATC TGGCGTCACC
GCTTTGGAGA TCGCTCGCGA ATACCACAAC GAGCCCGCCA TCGCGGCGCT CACGAAGGCG
GCTTCTCCGA ACCCAGCTTC AACACGACCT GACGTCCGCC TCTAG
 
Protein sequence
MPVPRIGAPL EPSQALHPRL HRRFPFDPPP AARLLGGVRT VTALLFSCCL AVCPAAALGA 
PEILLIAGAP SHGPGEHRFP AGCTLLADAL NESPHLVHAT AVDAWPAPAR LAAADVLVIF
SDGLERHVAR EHLAELRQHV AAGKGLAVLH FALEPSPGPL ADFLLENVGG RFEPDWSVNP
VWKLEHPIVG SHEVTRGVMP FSLEDEWYFH LRFRPEIVPV LQAHPPVDVL GEDGPRSGNP
TVRAALTAGE PQTLAWVFEQ NGRRAFGFTG GHFHRNWADE AFRRLVLNGI VWTAHAAVPP
GGVTSSAPAL PRFATIDEAI ARDDLADVQR HLALNPTLAR HGANAALAPL HQAILRNRTA
IALLLLEAGA DANAPDRSRR TPLHLAVERD NLPILEALLA RGARPSERDR IGWTPLHHAA
AKDRLDLARA LLKSGADPMT LSDGGGTPLH EAAASGSAEM VRLLLDAGVD ASVVSKSGVT
ALEIAREYHN EPAIAALTKA ASPNPASTRP DVRL