Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3539 |
Symbol | |
ID | 6204503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4608907 |
End bp | 4610451 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641693207 |
Product | hypothetical protein |
Protein accession | YP_001820416 |
Protein GI | 182415350 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.294562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTGC CACGAATAGG CGCGCCACTT GAGCCGAGCC AGGCGCTCCA CCCGCGCCTG CATCGTCGCT TCCCGTTTGA CCCGCCGCCC GCAGCTCGCT TGCTCGGCGG CGTGAGAACT GTGACCGCGC TGCTGTTTTC GTGCTGCCTC GCCGTGTGTC CGGCTGCGGC GCTCGGCGCG CCTGAAATTC TCCTGATCGC CGGCGCGCCC AGTCACGGCC CCGGCGAACA TCGGTTCCCC GCCGGTTGCA CCCTGCTCGC TGACGCCCTC AACGAAAGCC CGCACCTCGT TCACGCCACC GCGGTCGACG CCTGGCCGGC GCCCGCGCGG CTCGCCGCCG CCGACGTGCT GGTGATTTTT TCCGACGGAC TTGAACGCCA TGTTGCACGC GAACACCTCG CCGAGCTCCG CCAACACGTC GCCGCGGGCA AGGGGCTGGC CGTGCTCCAT TTCGCGCTCG AGCCGAGCCC GGGCCCGCTC GCTGACTTCC TGCTGGAGAA CGTCGGCGGC CGATTCGAGC CCGACTGGTC GGTGAATCCG GTCTGGAAAC TCGAGCATCC CATTGTCGGC TCACACGAGG TCACGCGCGG CGTGATGCCG TTCTCGCTCG AAGACGAATG GTATTTCCAC CTGCGGTTTC GGCCTGAGAT CGTTCCCGTG TTGCAGGCGC ATCCGCCGGT GGACGTCCTC GGCGAAGACG GCCCGCGCTC GGGCAATCCC ACCGTACGTG CGGCGCTCAC CGCCGGCGAA CCGCAAACTC TCGCCTGGGT GTTCGAGCAA AACGGCCGCC GCGCATTCGG CTTCACCGGC GGACACTTCC ATCGCAATTG GGCCGACGAA GCCTTTCGTC GACTGGTCTT GAACGGGATC GTCTGGACGG CGCACGCCGC GGTCCCGCCC GGCGGCGTCA CCTCGAGTGC CCCAGCGCTT CCCCGCTTCG CCACGATCGA CGAGGCGATT GCGCGCGACG ACCTGGCCGA CGTTCAGCGT CATCTCGCGC TCAATCCGAC GCTCGCCCGT CACGGCGCCA ACGCCGCGCT TGCACCCCTG CACCAGGCGA TTCTGCGCAA TCGGACCGCG ATCGCGCTGC TCCTGCTCGA GGCCGGCGCG GACGCCAACG CGCCGGACCG CAGCCGCCGG ACCCCGTTGC ACCTCGCCGT CGAACGCGAC AATCTCCCGA TCCTCGAAGC GCTGCTCGCC CGTGGCGCGC GACCGAGCGA ACGCGACCGG ATCGGCTGGA CGCCCCTGCA CCATGCCGCC GCCAAGGACC GCCTCGATCT CGCCCGCGCG CTGCTGAAAT CCGGCGCCGA TCCGATGACA CTCAGCGATG GCGGCGGCAC GCCGTTGCAC GAAGCCGCCG CCAGCGGCAG CGCGGAGATG GTGCGTCTGT TGCTCGATGC CGGCGTCGAC GCCAGCGTGG TTTCGAAATC TGGCGTCACC GCTTTGGAGA TCGCTCGCGA ATACCACAAC GAGCCCGCCA TCGCGGCGCT CACGAAGGCG GCTTCTCCGA ACCCAGCTTC AACACGACCT GACGTCCGCC TCTAG
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Protein sequence | MPVPRIGAPL EPSQALHPRL HRRFPFDPPP AARLLGGVRT VTALLFSCCL AVCPAAALGA PEILLIAGAP SHGPGEHRFP AGCTLLADAL NESPHLVHAT AVDAWPAPAR LAAADVLVIF SDGLERHVAR EHLAELRQHV AAGKGLAVLH FALEPSPGPL ADFLLENVGG RFEPDWSVNP VWKLEHPIVG SHEVTRGVMP FSLEDEWYFH LRFRPEIVPV LQAHPPVDVL GEDGPRSGNP TVRAALTAGE PQTLAWVFEQ NGRRAFGFTG GHFHRNWADE AFRRLVLNGI VWTAHAAVPP GGVTSSAPAL PRFATIDEAI ARDDLADVQR HLALNPTLAR HGANAALAPL HQAILRNRTA IALLLLEAGA DANAPDRSRR TPLHLAVERD NLPILEALLA RGARPSERDR IGWTPLHHAA AKDRLDLARA LLKSGADPMT LSDGGGTPLH EAAASGSAEM VRLLLDAGVD ASVVSKSGVT ALEIAREYHN EPAIAALTKA ASPNPASTRP DVRL
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