| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3521 |
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| Symbol | |
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| ID | 6208724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4584051 |
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| End bp | 4585640 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693188 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001820398 |
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| Protein GI | 182415332 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.598848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCC TCGTCGCCGA CAAGATCTCA CCCAAAGGAG TCGCCTATCT GCGTCAGCAG
CCGGGTTTCG AAGTGATCGA GGCTTACGGT TCCTCTCCGG AAAAAGTGCT GGAGTTGGTC
AAGGACGTGC ACGCGATTGC GGTGCGTTCG GAGACGAAGA TCACGGCCAA GGTGATCGCG
GCGGCGCCGC TGCTGAAAGT GGTCGGGCGG GCCGGCGTCG GCGTGGACAA CGTCGACGTC
GACGCGGCGA CGGAGCGCGG CGTCATCGTG ATGAACACGC CGTCGGGCAA CACGATCGCG
ACCGCGGAGC TGACCTTCAC GCACCTGCTG TGCGGGGCGC GGCCGGTGCC ACAGGCCGCG
GCGTCGATGC GCGCGGGCAA TTGGGACCGG AAGAGTTTCT CGGGCATCGA ACTGCTGCGC
AAAACGCTCG GCATCGTCGG GCTCGGCCGG ATCGGTTCCG AGGTGGCGAA GCGAGCCCAG
GCGTTCGGCA TGCGCGTGCT GGCCTACGAT CCCTACCTCG CGCCCAGCCG CGCGAAGGCG
ATGCAGATCG AATCAGTCAC GCTCGATGAA CTCCTGCAGC AGTCGGACTA CATCACCGTG
CACATGCCGC TGACGGACGA CACGAAATAC ATGATCGACG AAGCGGCCTT GGAGAAGTGC
AAGAAGGGCG TCCGGATCTT CAACTGCGCG CGCGGTGGCA TCATCAAGGA GACGGCGCTG
CTCGCGGCGC TCAAGTCAGG CAAGGTCGGC GCGGCGGGCC TCGACGTGTA CGAGGACGAG
CCGCTGGCGA AGGATAGCGA ATTCCGCTCG CTGCCGAACG TCGTGCTCAC GCCGCACCTG
GGCGCGTCGA CGGCGGAGGC GCAGGAATCG GTCGGCATCG AGATCGCGGA GCAGATCGCC
GACGTGTTGA ACGGCGGCGT GATCCGCAAT GCGGTGAACG TGCCCTCGCT CGATGCGAAC
ACGGTGAAGG TGCTCGGGCC CTACATCGAT CTCGGCACGA AGCTCGGCAC GCTGGTGCAG
CAGATTTCCC CCGCGCAGAT CGACCTGTTG AAGATCACGT ATTGGGGCAA GATCGTCGAC
CTCGACGCGA ATGCGATTAC CCGCTCCGTG CAGCGCGGCT ACCTGCGGCG GATCAGCGGC
GAGGAAGTGA ATTTCGTCAA CGCGCCGGTG TTGCTCGAGC GGCTGGGCGT GAAGGTCGAG
GTCGTAAAAT CGACCGGTGA CTCCGGCTAC AGCGAACTGA TCCAGGTCGA GGCGGTCGGG
CCCGACGGCG CGATCTACCG CGCCTCCGGC ACACGCATGG GCAAGCAGAA CCAGGCCCGC
ATTGTCAGCG TCAACGGCCG CGAGGTCGAG GTCGCCGCCG AGGGGAAGCT GCTCGTGCTC
GAAAACCTCG ACCAGCCCGG CATGGTGGGC GAGATCGGCA CGATCCTCGG CCAGGATGGC
GTGAACATCG CCGACATGTC GCTGAGCCGA CTGATCCCGG GCGGCACCGC CTACATGGTG
GTGCGCGTCG ACACCGAGCC GAGCGACAAC GCGCGGAAGA TCATCAAGGG TCACCCTGCG
ATCAAGCAGG CGAAGTTCGT GCAATTGTGA
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| Protein sequence | MKVLVADKIS PKGVAYLRQQ PGFEVIEAYG SSPEKVLELV KDVHAIAVRS ETKITAKVIA
AAPLLKVVGR AGVGVDNVDV DAATERGVIV MNTPSGNTIA TAELTFTHLL CGARPVPQAA
ASMRAGNWDR KSFSGIELLR KTLGIVGLGR IGSEVAKRAQ AFGMRVLAYD PYLAPSRAKA
MQIESVTLDE LLQQSDYITV HMPLTDDTKY MIDEAALEKC KKGVRIFNCA RGGIIKETAL
LAALKSGKVG AAGLDVYEDE PLAKDSEFRS LPNVVLTPHL GASTAEAQES VGIEIAEQIA
DVLNGGVIRN AVNVPSLDAN TVKVLGPYID LGTKLGTLVQ QISPAQIDLL KITYWGKIVD
LDANAITRSV QRGYLRRISG EEVNFVNAPV LLERLGVKVE VVKSTGDSGY SELIQVEAVG
PDGAIYRASG TRMGKQNQAR IVSVNGREVE VAAEGKLLVL ENLDQPGMVG EIGTILGQDG
VNIADMSLSR LIPGGTAYMV VRVDTEPSDN ARKIIKGHPA IKQAKFVQL
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