| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3470 |
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| Symbol | |
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| ID | 6204280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4514605 |
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| End bp | 4516176 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693136 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001820347 |
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| Protein GI | 182415281 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.884533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.876764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCGT CGCGTGCCAC AACTCCCATA TCTCCCGCCG TGGTTTCGCC CACCCATCGG
CTCCGCCTTT CGCCCGCCCA GATGTATGCC CGCGTGCTCG CCGGCGACCC GGCGTGGAAC
GGCCATTTTT TCACGGGCGT GCTCACCACG GGCATCTACT GCCTCCCATC CTGCAAGGCG
CGCAAACCCA AACGGGAGAA CGTGCGCTTT TTTCCGACGT GTGAAGCCGC GCGCGCCGCC
GGATTGCGTC CGTGCAAGAA ATGCCACCCC GACGATTTTG CCCGCGGCGC GGATCCCGTG
CTCGAAAGCG TCGAGCAGCT CGTGGCCGAA ATGCGGGCCA ACCCGGCGGC GTTTTCGGAG
GCGCGTGCGC TCGTGCGCCG GCTGGGGTTC GGCGTCACCC GCACGTTCGA ACTGCTCCGG
CTGCACTATC ACACCACGCC CGCCGAGTTG CTCACACGCG CGCGCATCGC CGCCGCCCAG
CAGCAGCTGC TCGCCGGGGC AACGCCGCTG GCCGACATCG CGTACAGCGT CGGTTTCGAT
GCCCTCTCCG TTTTCCACGA AAACTTCCGC CGGCTGACCG GGCTCACGCC GGCGCGCTAT
CGTGAGCTAC CCCATGCCCG GAGCTTCGAG CTGACACTGC CCGACGGCTA CCTGCTCGGC
TACCTGCGCC GCGCGCTCAG CCGGGATGCG CAAAGCGTGA GCGAGCGGCT CGAAGGCGAC
GTCTACACCG CCGCCGTGAA TCTGTCGGGC GGGCCGGCAT TGCTCACCCT GCGCCTCAAC
CCTTCGCCCG TTCGCGTCGA GGTCATTCCG GCTGCGGGTG GCACGGGCGT CCCGCCCGTG
GGTTCGCGCC CGCCTACAAA AGGCGAGCGT GTGCCGGACG TCGCAAGCGG CGTCCCTACC
AACACGCTCG AGGCCCATGC GATCGCGATC GGACTGCTCG GGCTCGAGGA TGACGCGAGC
TCGTTCGCGC GGCTCGCGCG CAAGCTCGGT TTGGCGCGGC TCGTCGCCGG TCGGAGTGAA
CTTCGCATCA GCCGCATTCC CTCCGTGTTC GACGGACTCG TCTGGGCGAT CATCGGCCAG
CAGATCAACT TCAGCTTCGC CTGCGTGTTG AAACGCCGGC TGACCGAGCT CGCGGGCACG
CGGCTGTCCA ACGGACTGAT GGCGCCGCCG ACGCCGACAG CGATCGCGCG GCTCGAGCCG
GACGAGCTCG TGCCCCTGCA GTTCTCGCGC CAGAAAGCAG GCTACCTGAT CACCACCGCG
CGGGCAATCA CCGCGGGCGA ATTGGATCTT GCGCAGCTCC CCTCGATGTC CGCCAGCCGC
GCGGAGCGCA CGCTGCTCGC GCTGCACGGG TTCGGCCCGT GGTCGGTAAA CTACGTGATG
ATGCGCGCGC TTGGGTTTGC CGACTGCGTG CCGCTCGGCG ACACCGGCGT GACCAGCGGG
CTGCAATCCC TCCTCCACCT CGAGCAACGG CCTGACGTCG ACGCCACGCG GCGGCTGATG
GCCGTGTTCT CTCCTCACCG CAGCCTCGCC ACGGCGCACC TGTGGCAACT CAACCTCCCC
CGGCCCACAT GA
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| Protein sequence | MVASRATTPI SPAVVSPTHR LRLSPAQMYA RVLAGDPAWN GHFFTGVLTT GIYCLPSCKA
RKPKRENVRF FPTCEAARAA GLRPCKKCHP DDFARGADPV LESVEQLVAE MRANPAAFSE
ARALVRRLGF GVTRTFELLR LHYHTTPAEL LTRARIAAAQ QQLLAGATPL ADIAYSVGFD
ALSVFHENFR RLTGLTPARY RELPHARSFE LTLPDGYLLG YLRRALSRDA QSVSERLEGD
VYTAAVNLSG GPALLTLRLN PSPVRVEVIP AAGGTGVPPV GSRPPTKGER VPDVASGVPT
NTLEAHAIAI GLLGLEDDAS SFARLARKLG LARLVAGRSE LRISRIPSVF DGLVWAIIGQ
QINFSFACVL KRRLTELAGT RLSNGLMAPP TPTAIARLEP DELVPLQFSR QKAGYLITTA
RAITAGELDL AQLPSMSASR AERTLLALHG FGPWSVNYVM MRALGFADCV PLGDTGVTSG
LQSLLHLEQR PDVDATRRLM AVFSPHRSLA TAHLWQLNLP RPT
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