Gene Oter_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3465 
Symbol 
ID6204444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4507939 
End bp4508283 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content60% 
IMG OID641693131 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001820342 
Protein GI182415276 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.113386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA TGTTCTCGCC CCTCGAAGTG CCTGGTTTTC TCGCGCAGCA AGCCGCACCG 
GGCGGCAGTC CCTGGACTCA GTTCATCTTC TTCGGCCTGC TGTTCGCGGC GATGTATTTC
CTGATGATCG CGCCGCAGCG CAAGAAGCAG AAGGAGCACG AGAAGATGCT GAAGGCCCTG
ACCAGCGGCG ACGAGATCGT CACCAGCGGC GGGATCTACG GCACGATCAC GAACGTGAAG
GACGATCGGT TCGTCGTGCG GATCGCGGAC AACACCAAGA TCGAGGTGGG CAAGGCGTTC
GTGACCGCGG TGGTGAAGAA GGTCGACGGC GAAGCGAAGA AATAA
 
Protein sequence
MTKMFSPLEV PGFLAQQAAP GGSPWTQFIF FGLLFAAMYF LMIAPQRKKQ KEHEKMLKAL 
TSGDEIVTSG GIYGTITNVK DDRFVVRIAD NTKIEVGKAF VTAVVKKVDG EAKK