| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3362 |
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| Symbol | |
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| ID | 6207377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4399369 |
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| End bp | 4400445 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693027 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001820239 |
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| Protein GI | 182415173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGGC TTGCACTCGC GCTCGGGCTC GGTGGCTGCA ACAAAAAGAC CGAGACGCGC
GGTGCCGCGG TCGCGCAACG TCAGCCAGTG GAGGTGGCGC CGCTTACGCG CCAGGATCTC
GCCGAGACCC TGAACCTCGT CGGATCGCTC GCCGCGAACG AATCCGCCAC GATCCGACCC
GAGACGACCG GGCTGGTGCG CGAGATCCAT TTCGAGGAAG GCCAGCAGGT CGTGAAGGGT
CAGGTGCTGG TGAAGATCGA CGACTCGGAG CTGCGGGCGC AGCTGACGCA GGCGGAAGCG
CGCTATCGGC TGGCTGAGCT CAATCTCCAG CGCGCGGAAC GGCTGGGCGA AACCCAGTCC
ACCAGCGTGG CGGATGTCGA TCGCGCGCGC TCGGAGTTCG CCTCCGCGAA ATCCGAGCTG
GACCTCATTC GTGTGCGGCT CGATCGGACG GAAATCCGTG CGCCGTTCGA TGGAGTGGTG
GGCGTTCGCA CGCTCTCGCC GGGCGACTAC GTCAACTCGC AGGCGGTGAT CACGACGATC
GACGACCTCA GCCGGATGAA AATCGATTTC CAGGTGCCGG AGCGCTTTGC GGGCAAGGTC
CGTCCGGGCA CCACGTTCGC GGTGCGTTCG CAGTCATTGC CCGCGGGCAC GGAGATCAGC
GGTGAAGTTT ACTTCGTGGC TTCCGTGGTC GATCGGGCCA CACGCTCCAG CGAGGTCAAG
GGGTTCGTCA ACACCCTCGC GCCCGGGCTC AAGCCCGGCA TGTTCACCAA TGTCGAACTC
GTACTCGAGG TGCACCACGG CGTGTTGACG GTGCCGGAAG GATCGATCCT GACTACGACG
CAAGGCACGC AGATTATCGC GGTGAAGGAT CAGGGTGCCG ACAAGACGGT GGAGTTCATT
CCCGTGCGCA CCGGGCTGCG CGCCAAGGGC TACGTCGAGG TCACGCCACT CAAGGGGGAA
CTCGTCGAAT CGCAGCAGAT CGTGGCCTCG GGCGTCGGCG CGCTGGTGCT GTACCCCGGC
ACGCTGATCG AGCCGCGACC GGTGGTGACC GCCTTCCAGA CCCGGACGCA GCTATGA
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| Protein sequence | MLGLALALGL GGCNKKTETR GAAVAQRQPV EVAPLTRQDL AETLNLVGSL AANESATIRP
ETTGLVREIH FEEGQQVVKG QVLVKIDDSE LRAQLTQAEA RYRLAELNLQ RAERLGETQS
TSVADVDRAR SEFASAKSEL DLIRVRLDRT EIRAPFDGVV GVRTLSPGDY VNSQAVITTI
DDLSRMKIDF QVPERFAGKV RPGTTFAVRS QSLPAGTEIS GEVYFVASVV DRATRSSEVK
GFVNTLAPGL KPGMFTNVEL VLEVHHGVLT VPEGSILTTT QGTQIIAVKD QGADKTVEFI
PVRTGLRAKG YVEVTPLKGE LVESQQIVAS GVGALVLYPG TLIEPRPVVT AFQTRTQL
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