| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3304 |
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| Symbol | |
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| ID | 6207478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4326664 |
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| End bp | 4328823 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692970 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001820183 |
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| Protein GI | 182415117 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00679496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.683271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TACCTGATTT CACCAAACTC GCCTACGACT CCTTCGCGTC GCTCGACGCG
AAGGGCGGCC CCAAGGTGGA GGGCGAGCCG GCGATGACCT ACGAGCATAT TCCCGTCAAA
CCGGTCTACA CCGCGGCGGA TCTGCCCGCC ACGAGCGAAC TCGACACGAT GCCTGGCCTC
GCGCCGTTCA CCCGCGGGCC GTATGCGACG ATGTATGTCG GCAAGCCGTG GACCGTGCGC
CAGTACGCCG GGTTCTCGAC CGCCGAGGAG TCGAACGCTT TCTACAAGCG CAATCTCGCC
GCCGGCCAGG CGGGTTTGTC CGTCGCGTTC GATCTCGCGA CGCACCGCGG CTATGACAGC
GATCACCCGC GTGTCGTCGG CGACGTCGGC AAGGCCGGCG TGGCGATCGA CTCGATCCTC
GACATGCAGA CGCTGTTCAA GGACATCCCG CTGAACAAGG TTTCGGTGTC GATGACGATG
AACGGCGCGG TGCTGCCGGT GATGGCGTTC TACATCTGCG CCGCCCTCGA ACAGGGCGCG
AAACTCGAGG AACTCGCAGG CACGATCCAG AACGACATCC TGAAGGAGTT CATGGTGCGG
AACACCTACA TCTATCCGCC GACTCCCTCG ATGAGGATCA TCGCCGACAT CTTCGCCTAC
ACCTCGACGA AGATGCCGAA GTTCAACTCC ATCTCGATCT CCGGTTATCA CATGCAGGAG
GCCGGAGCCA CGGCGGACCT CGAGCTGGCC TACACGCTGG CCGACGGTCT CGAATACCTG
CGTACCGGGG TGAAGGCGGG GCTGGGCATC GACGCGTTCG CGCCGCGGCT CTCGTTCTTC
TGGGCGATCG GCAAGAACTT CTTCATGGAA GTCGCGAAGA TGCGCGCCGC GCGCACGCTC
TGGTCGGAGA TCGTCGGCCA GTTCAATCCG AAGAATCCGA AATCGCGCGC GCTGCGCACG
CATTCGCAGA CGTCCGGCTG GTCGCTGACC GAGCAGGATC CGTTCAACAA CGTCGCGCGC
ACTTGCCTCG AGGCGCTGGC GGCCGCCTGC GGTCACACGC AGTCGCTGCA CACCAACGCG
CTCGACGAGG CGATCGCGCT GCCGACCGAT TTCTCCGCGC GCATCGCGCG CAACACGCAG
CTGCACCTCC AGCAGGAAAC CGGCATCTGT CAGGTCGTCG ATCCGTGGGG CGGCAGCTAC
TACGTCGAGG CGCTCACGCA CGAGCTGCTC ACGAAGGCCC GCGAGCATCT CGCCGAGGTC
GAGAAGCTCG GCGGCATGAC CAAGGCGATC GAAGCGGGCA TTCCGAAGCT CCGCATCGAA
GAGGCCGCGG CGCGTCGTCA GGCCCGGATC GATGCCGGCA AGGAGACGAT CGTCGGACTC
AACAAATACC GGCTCGAGAA GGAAGCGCCG CTCGACATTC TCGAAGTCGA CAACACCGCG
GTCCGCGAGG CGCAGATCAA GCGGTTGAAG GAACTCCGCG CGACGCGCGA TGAGCAGAAG
TGCCAGGCGG CGCTCGGCGC GTTGACGACG TCGGCCAAGA GCGGACAGGG CAACCTGCTC
GAACTCGCCG TCGCCGCCGC GCAGGCGCGG GCCACGCTGG GCGAAATCTC CGCGGCGCTC
GAGACGGTGT TCGGACGCTA TCAGGCGCAG ATTCGCTCGA TCTCGGGCGT GTACCGCCAG
GAATTCGGGG AGGACAAAGC CGTGAAGAAG ATCAAGGACA AGGTCGCGCA GTTCGAACAA
CGCGAGGGCC GCCGGCCGCG CATCCTGATC GCCAAGCTGG GGCAGGACGG CCACGACCGC
GGTGCCAAGG TGGTGTCGAC CGCGATGGCG GACCTCGGTT TCGACGTCGA CATTGGGCCG
CTCTTCCAAA CGCCGGAAGA GGCGGCGAAG ATGGCGGTCG AGAACGACGT GCACGTAGTC
GCGATGAGCT CGCTCGCCGC GGGTCACAAG ACACTGCTGC CGGCGCTGCG CGACGCGCTG
AAGGCGGCCG GTCGCGACGA CATCATGATC GTGTGCGGCG GCGTGATCCC CGCGCAGGAT
TACGACTTCC TGCTCGCGAA CGGTGCCAGC GCGATCTTCG GGCCCGGCAC GGTGATCCCG
AAGTCGACCG ACCGCGTGCT CGACCTGCTG CTCGAGCGGC TCGAACCGGC GAACGCGTAA
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| Protein sequence | MKNLPDFTKL AYDSFASLDA KGGPKVEGEP AMTYEHIPVK PVYTAADLPA TSELDTMPGL
APFTRGPYAT MYVGKPWTVR QYAGFSTAEE SNAFYKRNLA AGQAGLSVAF DLATHRGYDS
DHPRVVGDVG KAGVAIDSIL DMQTLFKDIP LNKVSVSMTM NGAVLPVMAF YICAALEQGA
KLEELAGTIQ NDILKEFMVR NTYIYPPTPS MRIIADIFAY TSTKMPKFNS ISISGYHMQE
AGATADLELA YTLADGLEYL RTGVKAGLGI DAFAPRLSFF WAIGKNFFME VAKMRAARTL
WSEIVGQFNP KNPKSRALRT HSQTSGWSLT EQDPFNNVAR TCLEALAAAC GHTQSLHTNA
LDEAIALPTD FSARIARNTQ LHLQQETGIC QVVDPWGGSY YVEALTHELL TKAREHLAEV
EKLGGMTKAI EAGIPKLRIE EAAARRQARI DAGKETIVGL NKYRLEKEAP LDILEVDNTA
VREAQIKRLK ELRATRDEQK CQAALGALTT SAKSGQGNLL ELAVAAAQAR ATLGEISAAL
ETVFGRYQAQ IRSISGVYRQ EFGEDKAVKK IKDKVAQFEQ REGRRPRILI AKLGQDGHDR
GAKVVSTAMA DLGFDVDIGP LFQTPEEAAK MAVENDVHVV AMSSLAAGHK TLLPALRDAL
KAAGRDDIMI VCGGVIPAQD YDFLLANGAS AIFGPGTVIP KSTDRVLDLL LERLEPANA
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