Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3132 |
Symbol | |
ID | 6205422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4075930 |
End bp | 4078155 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641692798 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001820012 |
Protein GI | 182414946 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.405756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA CACCGACCAT CATCTACACC AAGACCGACG AAGCCCCCGC CCTCGCGACC TATTCGCTCC TGCCGATCGT GCAGGCCTTC ACGAAGCATG CGGGCATCGC CGTCGAAACG CGCGACATCT CACTCGCGGG CCGGATCCTG GCGGCGTTCT CCGACCTGCT GCCCGCGAAC CAGCGGGTGG CCGATGCGCT GGCCGAGCTC GGCGCACTCA CGCTCAAACC GGAGGCGAAC ATCATCAAGC TTCCCAACAT CAGCGCATCC GTCCCGCAGC TTAAGGAAGC GATCGCCGAA CTGCAGGCGA AGGGCTTCGC CCTGCCCGAT TATCCCGAGT CGCCGAAATC CGACGCCGAG AAGGACGCCA AGGCGCGCTA CGATCGGGTG AAAGGCTCGG CCGTGAACCC GGTCCTGCGC GAAGGCAACT CGGACCGCCG CGCGCCGAAG GCGGTGAAGG ACTACGCGCG CAAGCATCCG CATTCGATGG GCGCGTGGTC GCCGACCTCC AAGACTCGCG TCGCCACGAT GGGCCGCGAC GATTTTTACG CGAACGAGAA GTCCGTGACG GTCCCCGCGG CGACCACCGT GCGGATCGAA TTCGAGTCAA CCGACGGCAA GGTCACCGTG CTCAAGGACA AGCTCGCACT GCTGGCGGGT GAGATCATCG ACGGCACGTT CATGAGCCGC AAGACGCTCG ACAGCTTCCT CGAGCAGCAG GTGGCGATCG CGCGGCAGGA CGGCGTGCTG TTTTCTGTTC ACCTCAAGGC GACGATGATG AAGGTGTCGG ACCCGATCAT CTTCGGCCAT GCGGTTCGCG CCTACTTCAA GGAGCTGCTC GCCAAGCATG CCGCCACGTT CGCCGAGCTC GGCGTCGATC TGAACAACGG CTTCGGCGAT CTCGTCGCGA AATTGGAGAA GCTGCCGCCG GCGAAGAAGG CCGAGATCGA GGCCGACATT CGCGCGACCT ACGCGGCCGG TCCCGCGGTG GCGATGGTGA ACTCCGATCA GGGCATCACC AATCTCCACG TGCCGAGCGA CGTCATCGTC GACGCTTCGA TGCCCGCGAT GATCCGCGTG GGCGGCAAGA TGTATGATGC CAACGGCAAG CTGCAGGACA CCCTCGCCGT GATCCCGGAC AGCAGTTACG CGGGCGTTTA CCAGGCCACC ATTGAGTTCT GCAAAAAGCA CGGCGCCTTC GATCCGCGGA CGATGGGCTC GGTCCCGAAC GTCGGGCTCA TGGCCCAGGC GGCGGAGGAG TACGGCTCGC ACAACAAAAC CTTCCACCTT CCGTCGAACG GCACGGTGCG CGTGGTGGAC GCGGCGGGTC GCGTTTATCT GGAGCACGCG GTCGCCGCGG GCGACATCTG GCGGGCGTGC CAGGCGAAGG ATGCGCCGGT CCGCGATTGG GTGAAGCTCG CGGTAAACCG CGCACGGCTC AGCGCGACGC CCGCGATCTT CTGGCTCGAC GAAAAGCGCG CCCACGACGC GCAGCTCATC GTCAAGGTGA AGGCCTACCT CGCCGATCAC GACACGACCG GGCTCGACAT CAAAATCCTT CCGCCCGCGG CGGCGTGCAC CGCCACGCTG GAGCGGCTCA AGGCCGGACA GGACACCATT AGTGTCACCG GTAATGTGCT GCGCGATTAT CTCACCGACC TCTTTCCCAT CCTCGAAGTC GGCACGAGTG CGAAGATGCT TTCGATCGTG CCGCTGATGA AGGGCGGCGG GCTGTTCGAA ACCGGCGCCG GCGGCTCCGC GCCGAAACAT GTCGAGCAGT TCCTGGCGGA GAACTATCTG CGCTGGGACA GCCTGGGCGA ATTCTTCGCG CTCGCCGCCT CCCTCGAGCA CTTGAGCCTC ACGTTCAAGC ACGAGAAGGC CAAGATCCTC GCCGACACGC TCGACGCGGC GACTGCCAAG TTCCTCGAAA ACGACCGCTC GCCCGGCCGC AAGCTCGGCA CGATCGACAA TCGTGGCAGC CATTTCTACC TCGCACTCTA CTGGGCGCAG GAGCTCGCGC GACAAAGCCG CGACGCCGAG CTCAAGCGGA TCTTCATCCC GCTCGCCGCG GAACTCGAAG CCGCAGAGCC GACAATTACC AGCGAGCTTC TCGCGGTGCA GGGGAAGCCG GCGGATATCG ACGGCTACTA CCGGCCGGAC GACGTGAAGG CCGCAGCGGC CCTCCGCCCC AGCGCAACCT TCAACCAGAT TCTCGCGACG CTCTGA
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Protein sequence | MSATPTIIYT KTDEAPALAT YSLLPIVQAF TKHAGIAVET RDISLAGRIL AAFSDLLPAN QRVADALAEL GALTLKPEAN IIKLPNISAS VPQLKEAIAE LQAKGFALPD YPESPKSDAE KDAKARYDRV KGSAVNPVLR EGNSDRRAPK AVKDYARKHP HSMGAWSPTS KTRVATMGRD DFYANEKSVT VPAATTVRIE FESTDGKVTV LKDKLALLAG EIIDGTFMSR KTLDSFLEQQ VAIARQDGVL FSVHLKATMM KVSDPIIFGH AVRAYFKELL AKHAATFAEL GVDLNNGFGD LVAKLEKLPP AKKAEIEADI RATYAAGPAV AMVNSDQGIT NLHVPSDVIV DASMPAMIRV GGKMYDANGK LQDTLAVIPD SSYAGVYQAT IEFCKKHGAF DPRTMGSVPN VGLMAQAAEE YGSHNKTFHL PSNGTVRVVD AAGRVYLEHA VAAGDIWRAC QAKDAPVRDW VKLAVNRARL SATPAIFWLD EKRAHDAQLI VKVKAYLADH DTTGLDIKIL PPAAACTATL ERLKAGQDTI SVTGNVLRDY LTDLFPILEV GTSAKMLSIV PLMKGGGLFE TGAGGSAPKH VEQFLAENYL RWDSLGEFFA LAASLEHLSL TFKHEKAKIL ADTLDAATAK FLENDRSPGR KLGTIDNRGS HFYLALYWAQ ELARQSRDAE LKRIFIPLAA ELEAAEPTIT SELLAVQGKP ADIDGYYRPD DVKAAAALRP SATFNQILAT L
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