| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3081 |
|---|
| Symbol | |
|---|
| ID | 6204571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4013033 |
|---|
| End bp | 4013617 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641692746 |
|---|
| Product | dephospho-CoA kinase |
|---|
| Protein accession | YP_001819961 |
|---|
| Protein GI | 182414895 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0237] Dephospho-CoA kinase |
|---|
| TIGRFAM ID | [TIGR00152] dephospho-CoA kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0546642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAG GTATCACGGG AGGGATCGGC TGCGGCAAGT CGACCGCCGC CGCGGGCTTT
GAGCGGCACG GGTTCCGGCG ATTGGATTCG GATGCGCTCG TGCGCGAGCG CGTGCTGGTT
TCCGCGGAGG CGAAGGCCGC GCTGCAGCAG CGCTATGGCG CGGAGGTGTT CGCGCCTGAT
GGCGGGGTGG ATCGGGCGCG GGTGGCGGCG CGCGTGTTTG CGGACGCCGC CGAACTGCGC
TGGTGGGAGG AGTTCGTGCA TCCGCGGGTG TACCAGCTGT GGCGCGAAGC GTTTGCCGCG
GCGCCGGCGG TGGCGTGGGC CGTGGAGGTG CCGCTGCTTT TCGAACAGCA GCTGGAAAAT
TGGTTTGATT TCACGATATG CGTCGCCTCT GCTCCGGCTC AGCAACTCGC CCGACTGGAG
CAGCGCGGTC TCCCTCGCGC GCTCGCCGAG CAACGAATTT CCAAGCAACT GCCACTGGCG
CATAAAATCG AATTGGCCGA TTTTGTCCTC TGGAACGACG GAGCGCCCGA GTTCCTCGCG
GATCAGATCA CCCGGCTGGT CGAAACCTTG CGGATCGCGC GTTGA
|
|---|
| Protein sequence | MILGITGGIG CGKSTAAAGF ERHGFRRLDS DALVRERVLV SAEAKAALQQ RYGAEVFAPD
GGVDRARVAA RVFADAAELR WWEEFVHPRV YQLWREAFAA APAVAWAVEV PLLFEQQLEN
WFDFTICVAS APAQQLARLE QRGLPRALAE QRISKQLPLA HKIELADFVL WNDGAPEFLA
DQITRLVETL RIAR
|
|---|
| |