Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3000 |
Symbol | |
ID | 6204225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3853842 |
End bp | 3854930 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641692665 |
Product | alanine--glyoxylate transaminase |
Protein accession | YP_001819881 |
Protein GI | 182414815 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.123854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACA AACTTTTCAT CCCCGGCCCC ATCGCCGTCT CGGAGAAGAC CCTCCGCGCC ATGTCGCAGC CCATGATCGG GCATCGCAGC ACGGACTTCG TTGCGCTCTA TCAGTCCATC CAACCGGAGT TGCAGGCTCT GTTCTACACC AAGGATCCGG TCTACCTCTC GACCAGCAGC GCGTGGGGCG TCATGGAAGG CGCCGTCCGA AACGTCACGC GCAAGAAGGT GCTGAACTGC ATGAACGGCG CGTTCTCGGA CAAGTGGAAC GACGTCGCGC AGCGCTGCGG CTTCGCCGCC GGCGCGCTGA AGTTCGATTG GGGCCAACCG GTCGATCCCG AGGCGGTGCG GCGCGAACTC GCGACCGGCG CCTACGACGC GATCACGCTC ATCCACAACG AAACCTCGTG CGGCTGCATG AGCGATCTGC CGGCGCTGAT GGCCGTGATC CGCCAGTTCC CGGACGTGAT CTCGATCGTC GACACCGTCA GCTCGTTCAG CGGAGTGCCG ATTAAAAAGG ACGAGCTCGG CATCGACGTG CTCATCACCG GCTCGCAGAA GGCGCTCGCG ATGCCGCCGG GGCTGGCGCT GTTCTCGGTC TCGAAACGCG CGCTCGACCG CGCCGCGTCA CAGCCCGGCC GCGGCTACTA TTTCGATTTC GTCGAGTTCC AGACGAATCA CGAAAAAGGC ATGACGCCGA GCACGCCCTC GATCGCGCAC ATCTACGCGC TCAAGTCGAA GCTCGAAGAC ATCAAGGCCG AGGGGGTCGA GAACCGCTAC GCGCGGCACG CCCGGCTAAA CAAGATGGTC CGCGACCACA TGGCGGCCAA AGGCTTCAAG CTGTTCCCGA AGGAGGGCTA CGGCTCGGTC ACGCTCAACT GCTTCGCGAA CACGCTGAAC ATCGATCTCG CCGCGTTGAA CAAGACGCTG AAATCGAAGC ACCACCTCGT GATCGATGGC GGCTACGGCA AGCTGAAGGG AAAGACCTTC CGGATCTCCA ACATGGGCGA TGAGACCGAC GAGACGATCG CCGCGATGCT GAAGTCCTTC GACGCCGCTT TCGCCGAGAC GCCGAAGCTC GCGAGCTGA
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Protein sequence | MSYKLFIPGP IAVSEKTLRA MSQPMIGHRS TDFVALYQSI QPELQALFYT KDPVYLSTSS AWGVMEGAVR NVTRKKVLNC MNGAFSDKWN DVAQRCGFAA GALKFDWGQP VDPEAVRREL ATGAYDAITL IHNETSCGCM SDLPALMAVI RQFPDVISIV DTVSSFSGVP IKKDELGIDV LITGSQKALA MPPGLALFSV SKRALDRAAS QPGRGYYFDF VEFQTNHEKG MTPSTPSIAH IYALKSKLED IKAEGVENRY ARHARLNKMV RDHMAAKGFK LFPKEGYGSV TLNCFANTLN IDLAALNKTL KSKHHLVIDG GYGKLKGKTF RISNMGDETD ETIAAMLKSF DAAFAETPKL AS
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