| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2992 |
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| Symbol | |
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| ID | 6204213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3842090 |
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| End bp | 3843508 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641692657 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001819873 |
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| Protein GI | 182414807 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CGACCTTCAA GCTCCCCGTC CGCGAAAAAC TCGCCTACGG CTGCGGCGAT
TTCGCGTCCT GCCTCTACTG GCGGACGTTC ATGGTCTACC TGCCGTTTTT CTACACCGAC
ATTTTCGGCA TCACCGCCGC CGCGCTCGCC ACGATGCTGC TCGTGAGCCG GATCTGGGAC
GGCATCAACG ATCCGATCAT CGGCCTGTTC GCCGACCGCA CGGAGACGCG CTGGGGCAAG
TTCCGCCCTT TCATCCTGTT TGGCGCGGTG CCGTTCGCGA TCTTCGGCGT GCTCACGTTC
ACCACGCCGA ACCTCGGACC GATGGGCAAA CTCGTCTGGG CCTATCTCAC CTACAACGGG
CTCATGATGC TCTACACGAC GGTGAACATT CCCTACACCT CGATGCTGGG GGTGATGACG
ACCGCCGCGT CGGACCGCAC GCAACTCGTT TCGGTGAAAT TCATGTTCGC CTTCGCCGCC
AACCTCGTCG TTTCGGCCAC GCTGCTGCCG ATCGTTGACG CGCTCGGCGG CGGCAGCGCG
CAGCGCGGCT GGCAACTGGC GTTCGTCGTC TACGGAGTCG TCGCGATCGG CTTTTTCATG
CTGACCGTTT TCGGCACGCG CGAGCGGATC AAACCGATGC CCGAAGCCAA CACCTCGGTG
CGCCGTGACC TCAAGCTCAT CCTCACCAAT AAAGCCTGGC TGCTGCTGAC GGCGACCACG
CTGATCTGGA TCCTGCATCT CGGGATCCAC TCCTCGGTCT CGGCGCACTA CTTCAAATAT
TTCATCTACG ACGGAAATCC CGACACGCCG CTGCCGTTCC TCGGCCGTTC GTTCACGATG
ACGACGCTGC TCTCGGCGTT CAACACGTTC AGCCAGGTCG GCGCAGTCAT CGGCGTGCTG
CTGACGAGCA CCTTGTCCAC CCGGTGGGCC AAACGTCCGC TCTTCATCGG CGGATTCGTC
CTCGCGATCG TTTTTGCGGG AGCATTTTAT TTCCTCCAGC CCGGCCAACT GCTCCAGATT
TTCGTAGCGG AAGCGTTGTT CAGCCTGTTC GGCGCCGCGC TGCCCGTGCT GCTCTGGGCG
ATGTATGCCG ATACCGCCGA TTACGGCGAG TGGAAGACCG GCCGGCGTAC GACCGGCCTC
GTCTTTTCGG CCTCAACCAT GAGTCAGAAG GTCGGCTGGG CGCTCGCCGC GTTCGTCGCG
TTCCAGGCGC TCGCGTTCGT CGGGTTCACC GCGGACATGG CGCCGACGCC CGAGGTCAAA
AACAACCTCG TACTGATGAT GAGCCTCGTG CCGGTTGGTT TCGGCGTGCT CGCGCTCGTG
ATCTTCCACT TCTATCCGCT CACCGATCAG CGCGTGAACG AGATGAACGC CGAGCTCAAG
CAACGCCGCA TCGCCGCCGG ACTGCCGTCT GAAGTGTAG
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| Protein sequence | MSTPTFKLPV REKLAYGCGD FASCLYWRTF MVYLPFFYTD IFGITAAALA TMLLVSRIWD
GINDPIIGLF ADRTETRWGK FRPFILFGAV PFAIFGVLTF TTPNLGPMGK LVWAYLTYNG
LMMLYTTVNI PYTSMLGVMT TAASDRTQLV SVKFMFAFAA NLVVSATLLP IVDALGGGSA
QRGWQLAFVV YGVVAIGFFM LTVFGTRERI KPMPEANTSV RRDLKLILTN KAWLLLTATT
LIWILHLGIH SSVSAHYFKY FIYDGNPDTP LPFLGRSFTM TTLLSAFNTF SQVGAVIGVL
LTSTLSTRWA KRPLFIGGFV LAIVFAGAFY FLQPGQLLQI FVAEALFSLF GAALPVLLWA
MYADTADYGE WKTGRRTTGL VFSASTMSQK VGWALAAFVA FQALAFVGFT ADMAPTPEVK
NNLVLMMSLV PVGFGVLALV IFHFYPLTDQ RVNEMNAELK QRRIAAGLPS EV
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