| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2860 |
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| Symbol | |
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| ID | 6207027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3656276 |
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| End bp | 3657949 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641692524 |
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| Product | ribosomal protein S1 |
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| Protein accession | YP_001819741 |
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| Protein GI | 182414675 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.105288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAG TCATGCAAGA CCTGCTGGCG CAGTCCTCCT TCGACAAGTT GAAGGAAGGT
TCGATTGTCC CCGGCGTCAT CACAGAAATC CGCCAGAATG AGGTCGTCGT CGACATCGGC
GGCAAATCCG AAGGCTTGGT CCCCGCAAAC GAGTTCATCG ATATCGGCGA GCTGCAAGTT
GGCTCCACGA TCGAGGTCCT CGTCCAGAAA CTCGAAGGCA AGGACGGCGC GCCGATCCTG
TCGTTCGACC TGGCCGAGCA GAAGAAGAAT TGGGACAACA TCCTCACCAA GTTCCCTGAG
GGCTCCGTCG CGACCGGCCG CGTGAAGGCC AAGGTCAAGG GCGGCTTGAT CGTCTCGATC
GGCGTCGACG CCTTCATGCC CGCGTCGCAC ATCGATGTGC AGCCCCCGAA GAACCTCGAT
CAATACGTCG GCCAGACCTA CGATTTCAAG GTTCTCAAAA TCAATCTCGA GCGGAAGAAC
ATCGTTCTCT CGCGCCGCGA GCTCATCGAG GAACAGCGCA CCAACAAGCG TCGCGCGCTG
CTCGACTCGA TCCAGCCGGG CCAAATCCGC CGTGGCGTGG TCAAGAACAT CACCGACTTC
GGCGCGTTCA TCGACCTCGA CGGCATGGAC GGCCTGCTCC ACATCACCGA CATGTCGTGG
GGCCGCATCT CGCACCCGAG CGAAATGCTC AAGCAGGGCG AGGAAGTTCA GGTCATGATC
ATCGAGGTGA ACCGCGAGAA GGAACGCGTT TCGCTCGGCC TAAAGCAGAC CACGAAGAAC
CCGTGGGACG AGATCGACCG CAAGTATCCG GTCGGCGCCA AGGTCCACGG CAAGGTGGTC
AACCTGGTGC CCTACGGCGC GTTCGTCGAA ATCGAACCCG GCGTCGAAGG CCTCGTGCAC
ATCACCGAGA TGTCCTGGAC GAAGCGCATC ACCAAGCCCT CCGAGTTGCT CAAGGTCGGC
CAGGAGCTCG ATGCGGTGGT CCTCGGCATC CAGAAGGAAG AGCAGAAGAT CTCGCTCGGC
CTGCGCCAGC TGGAGCCGAA TCCGTGGGAC ATGGTTCGCC ACAATTACCC GATCGGTGCG
CGCGTGCGCG GCAAGGTCCG CAACATGACG ACCTACGGCG CCTTCATCGA ACTCGAGGAA
GGCATCGACG GCATGGTGCA CGTCTCCGAC ATGAGCTGGA CCCGCAAGGT CAACCACCCG
TCGGAAATCC TGAAGAAGGG CGACGAAGTG GACGCGATCG TGCTCGACGT GGATCCGCAG
CAGCAGCGGA TCAGCCTCGG CATGAAGCAG CTCGCCACCG ATCCGTGGTC GGACATCGAT
GCGCACTTCC GCATCGGCGA CGTCGTTACC GGCACGGTGA CGAAGCTGAC CTCGTTCGGC
GCCTTCGTGG AATTGAAGGA CGGCATCGAC GGTCTCGTGC ACATCTCGCA GATCAGCGAG
GAGCGCATCG ACAAGGTGAA GGACGTCCTG AAGCCGGGCC AGCAGGTGAC CGCTCGCGTG
ATCAAGATCG ATCGCGAAGA GCGTCGCCTC GGCCTGTCGA TCAAGGCGGC CAACTACTCG
GCGGAGCAGC TCGCGGCGGA GACGAACGCC TTCGAGGCGC TCAACCGCAG CAGTGCCGGC
ACCGACATGA TGAACCTCGG CGACATCCTC GACGAGGCGT CGAAGAAGGA ATAA
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| Protein sequence | MSSVMQDLLA QSSFDKLKEG SIVPGVITEI RQNEVVVDIG GKSEGLVPAN EFIDIGELQV
GSTIEVLVQK LEGKDGAPIL SFDLAEQKKN WDNILTKFPE GSVATGRVKA KVKGGLIVSI
GVDAFMPASH IDVQPPKNLD QYVGQTYDFK VLKINLERKN IVLSRRELIE EQRTNKRRAL
LDSIQPGQIR RGVVKNITDF GAFIDLDGMD GLLHITDMSW GRISHPSEML KQGEEVQVMI
IEVNREKERV SLGLKQTTKN PWDEIDRKYP VGAKVHGKVV NLVPYGAFVE IEPGVEGLVH
ITEMSWTKRI TKPSELLKVG QELDAVVLGI QKEEQKISLG LRQLEPNPWD MVRHNYPIGA
RVRGKVRNMT TYGAFIELEE GIDGMVHVSD MSWTRKVNHP SEILKKGDEV DAIVLDVDPQ
QQRISLGMKQ LATDPWSDID AHFRIGDVVT GTVTKLTSFG AFVELKDGID GLVHISQISE
ERIDKVKDVL KPGQQVTARV IKIDREERRL GLSIKAANYS AEQLAAETNA FEALNRSSAG
TDMMNLGDIL DEASKKE
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