Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2843 |
Symbol | |
ID | 6206228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3629563 |
End bp | 3630126 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641692507 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001819724 |
Protein GI | 182414658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.175188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0579313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAAAA CGGTCTTGTG GGCCTTGGTG CTCGCGGCCA GTGCGAGCGC GCAAACCCCG TCGGTTGAAC TGGCCAATCT GCGGGAAGAC GTGCGCGGAC TGGTGCAGCG CGTTGGTGAG CTTTCGCTGC GTGTCGAACA GCTCGAGCGC GAAAACACCC AGCTGCGTGC GCAGGCCGGT GAAGCGGGAC GGTCCTACGC CACCGTGGCG CAGCTCAACG AAGCCGTGGC CGCGCTGAAC CAGAGCATCC GCGCCAGCGC AGCGAGCACC CGGTCGGAGA CGCTGCAGCA GGTGAGCGGG CAAATGGAAA CGCTCGCGAA GCAAACCAAC GCCGCGATCG ACTCGCTGGC GAAAGGCCTG GCCACGCGCG CTCCGGTGCA GACGACGTTC ACCGAAGATT ATCCGAAGGA AGGCATCAGC TACACGGTGC AGCGCGGCGA CACGCTCGCG GTCATCGCGC GCAAAACCGG CGCGAAGGTG CAGGACATCG TCAACGCGAA CAAGATTTCC GATCCGTCCC GGATCAACGT CGGCCAGACC CTTTTTATCC CCGGAGGAAA GTAA
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Protein sequence | MWKTVLWALV LAASASAQTP SVELANLRED VRGLVQRVGE LSLRVEQLER ENTQLRAQAG EAGRSYATVA QLNEAVAALN QSIRASAAST RSETLQQVSG QMETLAKQTN AAIDSLAKGL ATRAPVQTTF TEDYPKEGIS YTVQRGDTLA VIARKTGAKV QDIVNANKIS DPSRINVGQT LFIPGGK
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