| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2710 |
|---|
| Symbol | |
|---|
| ID | 6205171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3471861 |
|---|
| End bp | 3472964 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641692370 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001819591 |
|---|
| Protein GI | 182414525 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.395873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC TCCTCGTCCA GGATTTCCTC CGCAGCGGCG GCACCGAGCG GCAGTCCGTG
CTCCTCGCCA ACGCATTTGC CGAGGCCGGA CACGCGGTCA CCCTGCTCAC GTTTCGGCCG
GCCGGACCGC TCGCCGCGAC GATTTCCGCG CGGGTGACGC ACCGCACGCT GCAGCCTTTC
GACACCACGC TCGACTGGTT CGCGCCGCGG CTGCTCGGCA CCGCAGCACG ACTCGCGCCC
GACATCGTAC TCTGTCTCGG CCGGATGGCG AACTGCTACG CCGGCGCGCT GCAGCGCCGG
CTCGGCCCGC GCACCGCGGT GATTGCCACG ATGCGCACCG GCAAATCGCT GCCGTGGCTG
TTCCGCCGCT CGCTGCGTCA GGTGCGCGCC GTCGTGGCCA ACAGCCGCGA CGCGTGCGAC
GTTCTCGTCC AACGCTACAC CGTCGACCCG GCAGGAATCA CAGTCATCCA CAACTCGCTG
GTTTTTCCCG CGCACGCGGC CGGCGCTGGA GACGCACTCC CCGCGTCGCG CGCGGCGCTG
CGCGAACAGT TCGGCGCCCG GCCGGCGACG TTCGTCCTGC TATGCGTAGC GATGTTTCGT
CCGGAGAAAA ACCAGCGCGA GCTGATCGAG ATCGCCGCAG GACTGCCGGC GGAGTTCGAC
TGGCAGCTGT GGCTGGCCGG CGATGGGCCC GCGCGCGCCG ACTGTGAACA GCTCGCCCGC
GCGAAAAACT GCCTCGATCG CGTCCGGTTT CCCGGCTTCC TGCGCGATCC GTCCGCACTT
TATGCAGCGG CCGACGTGGC GGTGCACGCG TCCGCGAGCG AGTCGCTGTC GAATTTCCTG
ATCGAGGCGC AGGCCCACGG ACTGCCGGCC GTCGCCTACG CCGCGCAAGG CATCGCAGAG
TGTTTCGTTC CTGGGCAAAC CGGTTGGGTG ATTCCGCGCG GCGAACGCGA TGCGTTTCGC
GATGCGCTCG AGCAACTCGC GCGCGCCACG CCGCCAGCAC GCGCCGCCCG TGCCGCCGCC
GCCCGGGATT TCGCACGCAA CACCTTCGAT CCGGCCCGCC AGGTCGCGGC TTATCTCGAG
CTGTTCAGCC GGTTGCGCGG CTGA
|
|---|
| Protein sequence | MKILLVQDFL RSGGTERQSV LLANAFAEAG HAVTLLTFRP AGPLAATISA RVTHRTLQPF
DTTLDWFAPR LLGTAARLAP DIVLCLGRMA NCYAGALQRR LGPRTAVIAT MRTGKSLPWL
FRRSLRQVRA VVANSRDACD VLVQRYTVDP AGITVIHNSL VFPAHAAGAG DALPASRAAL
REQFGARPAT FVLLCVAMFR PEKNQRELIE IAAGLPAEFD WQLWLAGDGP ARADCEQLAR
AKNCLDRVRF PGFLRDPSAL YAAADVAVHA SASESLSNFL IEAQAHGLPA VAYAAQGIAE
CFVPGQTGWV IPRGERDAFR DALEQLARAT PPARAARAAA ARDFARNTFD PARQVAAYLE
LFSRLRG
|
|---|
| |