| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2634 |
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| Symbol | |
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| ID | 6207747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3377562 |
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| End bp | 3378470 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641692294 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001819515 |
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| Protein GI | 182414449 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.258799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC TGAAGATCTT CGGCGTCGTC GTGGGCGTCC ACGTCTTTGC CTTGATTCTG
ATTTTCGCCA ATCCGGGTTG CAGTTCCGCC AAGCGGCCGA CGCGTGACGC CTCTGAGACC
GTGATCGCCA GCGGTGGCGA TACCAGCGCG ATGGTCGCGC CGGTGGCCGC GACCAGCGAG
TCGCCGGTCA GCCTCGCGCC GCCGCCCTCG TTCGATCCGA ATGCGCCCGC GACTGCGGTG
GTGCGTTTCA CGCCGACGCG TCCCGGCACG CCGACCGCCG CCGCGCTCGA AGCCGCGCCG
GTTGCGGACG TCACGCCGGC GACGACGTAC ACCGTCGTGC GCGGCGATAG CCTCTGGACG
ATCGCCAAGA AGCACCACAG CTCGGTCGGT GAAATCGCGG CGGCCAACAA TCTCCGCACC
AGCGCGACGG TGCGCGTGGG ACAGAAGCTG ATCATCCCGG CCAAGTCGGT CGCGGGGAGC
GCGCAGTTCC AGCCAGCGGA AAGCACGCCG GTCGTCGCCG CGACACCGAC GGCGCCGCGG
GCTTCGGGCG AAGCAGTCAA GCACATCGTG CGGCCGGGCG AAACGCTCGG CGCCATCGCG
CGGAAATATC AGGTGAAGGT CGGCGACATC GCCACCGCGA ACGCCATTTC GGATCCGGCG
CGGATCCGGC CCGGCATGGA GTTGACCATC CCGGGCTGGC AGGCGCCGAC GAGCCGCGCG
ACGCGCGCGA CGCCGAGCAC TGCCACATCG CGCCCGGCGG CCCAGGAACC CACGGCGACG
CCCGCGACCC AACCCGCGAC CACGGAGTCG GTGCCGACGA TCGTCATCCC CGCCCCGGAA
CAGGATCTCG ATGCTGGGTT GCGCGACAAG CAAGGCGATG CGCCGGTGAT TCCGGTGGAG
GAAAAGTGA
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| Protein sequence | MKILKIFGVV VGVHVFALIL IFANPGCSSA KRPTRDASET VIASGGDTSA MVAPVAATSE
SPVSLAPPPS FDPNAPATAV VRFTPTRPGT PTAAALEAAP VADVTPATTY TVVRGDSLWT
IAKKHHSSVG EIAAANNLRT SATVRVGQKL IIPAKSVAGS AQFQPAESTP VVAATPTAPR
ASGEAVKHIV RPGETLGAIA RKYQVKVGDI ATANAISDPA RIRPGMELTI PGWQAPTSRA
TRATPSTATS RPAAQEPTAT PATQPATTES VPTIVIPAPE QDLDAGLRDK QGDAPVIPVE
EK
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