| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2503 |
|---|
| Symbol | |
|---|
| ID | 6206507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3222473 |
|---|
| End bp | 3223543 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692163 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819385 |
|---|
| Protein GI | 182414319 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5039] Exopolysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.394231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCG CCTCCCTCGC GTTTCCGTAC TCGCTTTGGT ACTTCGCCCG TCGCGCGGGC
TCCGGCGACA TCGCGCCGAC CCCGGCGCGT GACTTGGAGC GAGGCGACAG GGGAATCGAC
GCTTCACCTG CGGCCGGCCC GGCTCACGCG CGCGGCGGAT TGCCGCCGGC GGCCTTTGAT
GAGCTCCGCG AGACGTTGCG CGCGGTGAGC GGTCGACGCA TCACCCTGCT CGTCAATCGC
GGCAATCGCG GGGATGGGGT GATCCACCTC GGCGGGCGGC AATTGTTGCG TTCGCTCGAT
CTCCGTTGGA CGGAGGTTTA CGAGCCCAGG GCGCCGGAAA AGATTCAGGC CGACGTGCTG
CTCGTGTTCG GCAATGGCGC TTTCTGCCGG GCGACGCATT CCCTGATCCC GATCGTCCAG
CGCTACGCGG ATCAGGTTTC CCGCGTGATC ATCCTGCCGG CGTCGTTTGA CCTCCGCTGC
CCTGCGGTGC GAACGTTTGC CGCGTCCTGG GATGATCGCT ACACCGTGTT TTGTCGCGAG
CGGCGGAGCT TCGGGGACCT TGAAGCGGCG GGCGTGCGGC CGCGGCGGCT GGCGCTGTCT
CATGACCTGG CGTTCCTCGC CGATCTTGGC CGCTGGGCGC GACGACCGCA CAGCGGCACC
AGCGGAATCT TCCGGCGCGA CGGCGAAGCG GTGTTCGACT GGCGGCCGCG CCATCTGCCC
GGTACCGACG TTTCGCGTGG ACCCGACTCG GAGTCGCACG TGCTCCTCGA CTACGTGGCG
CGGCACGCGG TGGTACACAC CGACCGCACG CACGCCGCGA TCACGGCGGC GATGATGGGG
CGCGAGGTCT GGCTCTATCG CAATGCCTAC TTCAAGAACG AGGCGATCTA CGAACACAGC
CTCGTCCATT GGCCGCGCGT GCATTTCGTC GGACGGCTGC CGTTCTCGTT CCGTCAGCTG
GTGCGGTCCC TCTACTTTCA CCATCTGCAG CGCCGGGCCT ACAAGCTGCG CCGCCGCTAT
CGGGGGTGGA AGGAACTGAA ACGCCGCGGC GCTTCGGCCG GCCGGCGCTA G
|
|---|
| Protein sequence | MPFASLAFPY SLWYFARRAG SGDIAPTPAR DLERGDRGID ASPAAGPAHA RGGLPPAAFD
ELRETLRAVS GRRITLLVNR GNRGDGVIHL GGRQLLRSLD LRWTEVYEPR APEKIQADVL
LVFGNGAFCR ATHSLIPIVQ RYADQVSRVI ILPASFDLRC PAVRTFAASW DDRYTVFCRE
RRSFGDLEAA GVRPRRLALS HDLAFLADLG RWARRPHSGT SGIFRRDGEA VFDWRPRHLP
GTDVSRGPDS ESHVLLDYVA RHAVVHTDRT HAAITAAMMG REVWLYRNAY FKNEAIYEHS
LVHWPRVHFV GRLPFSFRQL VRSLYFHHLQ RRAYKLRRRY RGWKELKRRG ASAGRR
|
|---|
| |