| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2471 |
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| Symbol | |
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| ID | 6207089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3178045 |
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| End bp | 3183078 |
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| Gene Length | 5034 bp |
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| Protein Length | 1677 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692130 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001819353 |
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| Protein GI | 182414287 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.785659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.992917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTGC ACCCGCTGCG CGATATCAAG GCTTTCGGCG CCTCACCGAA AGGGGGCGGG
TGCGTTCGCG CTGGTCTGGC GGCGGCGTTG TTCGCGCCGG TGCGAAGCCC GGCGGCGGAA
CCGGTGCTGG CGGGATTCAC CGGGAGCGGC TGGTGGCTGG CGGCCGCGTT GGTCGTTGCT
GCAGCCGTGG TGACGTGGCT GATCACGAAA GCGATCGGGC GGCGCACCGC CGGTCAGGCG
GGCCAGCTGA AGTCGCTGCT GGAGTTCGCC AACTGCCTGC TGTGGGAAGC GCGCGTGGAA
TTGCAGGGTG ACGCGTTGAA GTGGGACGTC TCGCTGCAAT CGACCGCGCT CGCGCAGCAG
CTCTTCGGTC ACCTGCCGCC GCGGCCCGAC GAAGGACTGT GGGACCGCTT CGAGGTGCCG
GAGCGCGAGG AGATGGAGGC CCGCTGCCGG ACGGCACTGC GCGAGCGGCG TTCGCACTAC
GAACACCAAT TCAGTTTCGT GCGCGAGGGC CGGCCGGTGT GGCTGCGGGA AAGCGTCACG
GTCACGCCGG AGAGCGGCAA TCGGTTTCAC CTCGTCGGAT TGGTGACGGA CGTCACCCGC
CAACGGGAGA CGGAACTCGC GCGGCGCGCG AGCGAGGAGC GCGTGCGGCA ACTGTTGTCG
CGGTCGGACT GCATGCTGTG GGAAGCGCGC GTGCGGCAGG ACGAGGCGGG GGCGTTTCAC
TGGGACTGGT TCATCCCGAA ATCCGAACTC TACCGGAGAC TGGTGGGCGA GGCAGGTGGG
CCGAATCGGA TGCCCTGGGA TGCGTCGATC GTGCCGGAGT ACGGCGAGAT CGAGGCCCGC
GCGAAGAGCG CGATGCGGGA AGGCCGTGAC GGTTACGAGC AGGAGTTTCG GGTGGTGGCG
AACAACTCCG TGTTGTGGAT GCACGAGCAG GTGGTGGTCA AAGCGCTCAG CCCGCGCGAG
TGGATGCTGC AGGGCGTCGT GATCGACATC ACGGTGCAGC GGCAGGCGGA GGAATCGAAA
CGCGCGAGCG AGGCGCAGCT CCAGCAGGTG ATGGGGACGG CGGATTTTCT TTTGTGGCAC
GCGCGGGTGT TTGTCGGACC GGATGGTCGA ATGCAGTGGG TGTTGAACGT GCCGGGTTCG
ACGCTGTATC GCCGGCTGTT CGGACGGGAT CCGCAGCACC CGCTGGCGCT GCCGTGGAAT
CAGCTGGTCA GCGCAGACGT GTATGCGCAG ATGGACGCGC GGTCGGCGCA TGCGATCAAA
ACAGGCGCCG AAGGTTACGA GCAGGAATTT CCGGCCCGCC GGGGCAGCGA GGAATTCTGG
CTGCGCGAGC AGGCGACGAT CCGGGCGGTG GGGCCCGGCG AGTGGCAGGT GGTGGGCATC
GTCACCGACG CGACGACACG GCACCTGGCC GAGGAGGCGC GGTTGGCGAG CGAACGCGCG
CTGCGGGAGA TTCTCGAGCG CGCGGGCTGT CTGCTCTGGC GCGCGACGGT GATGCGGACC
GAAGAGGGCG TGCGGTGGAC GGAGTTTGAG ATGCCGGCCT CGCGACTGAG CACGGAAATT
TTTGGAGGGC GGATGCCGAC GCGGTCGGAC CAGCTGTGGG ATTATGCGGA AGTGCCCGAT
CTGGCGCAGA TGAACGTGGT GAGCACGCGG GCGCTGCTGT CGGGGTCGCA AGGTTACGAG
CAGGAATTTC GGGCGGTACA GGGCGACCGG CTGTTCTGGT TGCACGAGCA GGTGGCGATC
ACGAAGACCG GGCCGGACGA ATGGCACGCG GTGGGTGTGG TCACGGACGT GACGCAGCGC
CACCTCGCCC AAGAGGCGCA GCGGCAAAGC GAAGTACGGC TCGAGGAGTT GCTGCGCACG
GCCGACTGCC TGATCTGGCA AGGCGAGGTG TCACTGCGCA GCGATGGCAC GCTCGAGTGG
GTGTTGTATG TGCCGCGGTC GCGGCTGTTC CGCCGCATCT TCGGGCATGA TCCGCAGGGC
AAGGTGATCC GCTGGGACGA GGTGCGCGTG CCGGAGTTGC CGGAGATGCA GCGCACCGCG
CGCATGGCGC TGTCGAGCGG CCATCCGGGC TATGAGCAGG TGTTCCACGT GCCGAAGCCG
AATGGCGACA TCTGGGTGAC GGAGCAGGTG ACGATCAGTC CGGCCGGTCC GCAACGGTGG
AGCGTGGTCG GCGTGATTAC CGACATCACG GCGCGGCGCG AGGCGGAGGA GGCGCGGCGG
ACCACCGAGG CGCAACTGCA GCAGATCCTC GAGCTGGCGG ATTGCATGGT CTGGCAGGCG
ACCATCACGG AGCACGAAGA CGGGGAACTG GACTGGAAAT TGTTCACGCC GAATTCCGTG
CTTTACCGCC GGTTGTTTGG CGACGGCGAA GGCGAGCCCG AGATGGGCTG GGACCGGCTC
GATGTGCCGG AGCACGCGGA GATGCACGAG CGCGCCACCG CGGCGATTCG TCGGCGCGAT
CCCGGCTACG AGCAGGAGTT CCGGGTCGTG CTGCCGCAGG GCGTGGTCTG GCTGCGCGAA
GTGGTGACGG TGACGGGCCT CGACGAGCAC CGCTTCCGGC TCGTCGGCGT GATCACCGAC
ATCACGGCGC AACGCGAGGC GCAGGAGGCG TATCGCGCGA GCGTGGCGCA GGTGGAGCAG
ATGCTGGTGG CGGCGGATTG CACGCTGTGG CAGGCGCGGG TGTTTGAGGT GGCGCCGCGG
CAGTTGCGTT GGGTGATGTT TGTCCCGCGC TCGCGGTTGT ACCGGGAGCT GTTCGGCCGC
GATCCGTCCC CGCCGGCGGG GCTGCCCTGG ACGGAGGTGA CCGACGCGGC TACGCGGGCG
GAGATCGACC GGCACGCGAC GGAAGCGATC CTCGGCGAGC AGCCGGCCTA TGAGCAGGAA
TTCCGCGCCC AACGCGGCGC GCGAGCGTTC TGGCTGCATG AGCAGGTGTC GATCACGCCG
ATCGGCCCCG GCGAGTGGCG GCTGGTGGGC GTGATGACCG ACATGACGGC GCGACGCGAA
GCCGAGCAGG CGGTACGGGC GTCGGAGCTG CGGTATCGCA CGCTTTTCCA GCACATGCCC
GTGGCGATCA TTGAAATCGA TTTTAGCGAA GTCGGGCGCT GGCTGGCGTC GGTGCGGGCG
CGAGGCATCA CCGACCTGAG CGCGTGGTTA CGGGCGCATC CGCGGGAGTT GCTGCGGCCC
GCGCGGTTGA TTCGCGTGCT GGACTGCAAC GATACCGCGA TGGACGTGCT GCGCGCGACC
GGCCCGAGCG ACTTCCGCCG GCGGCGGATG CGGCTGGCCA CGCCGGACAT GATGGAGCTG
GTGCGTTCGG CGATCCTGTG CCTGTGGGAC GAGCGGAACA CGCTCGAGGC CGAGGTGGAG
ATGCGCGACT TCGAAGGCGG CCTGCACGAG ATGAACGTGC GATGGTGGAT GGAGCTCACC
GAGGAGGGGC TCGATTTCCG GCAATCGGTG CTGGTGCTCG TCGACCTCAC CGAGCTCAAG
CAGGCCGAGG CGGCGCTCGC GGCGGAGAAA GAGCGGCTCG CGGTGACGTT GCGCGCGATG
GCGGAAGGCG TGATCACGAC GGACGTCGAA GGTCGGGTGC AGTTCATCAA CGACGCGGCG
GTGTCGTTCA CGCAGTGGGA AGCCAGCGCG GCGATCGGGC GGCCGGTGCA GGAGGTCTGC
CTGCTCGAGA ACGATCGCAC CGGCGAACGC GTGGAGATGC CGGTCGCGCG GGTGGGCCGC
GGCGACGTGG TGATGGATCT GCCGCCCCGC ACACGGTTGG TGCGACGCGA CGGCGCGAGC
CGGCTGGTCG AAGGCTGCTG CGCGCCGATC CACTCGGCGG TGAGCAAGGT GATCGGGACG
GTCTTCGTGT TCCGCGACGT GACGGAGCAC GAGCGGCTCG AACAGGAGCT GGTCCGGGCG
ACGAAGCTGG AATCCGTCGG AATTCTCGCC GGCGGCATCG CGCACGATTT CAACAACATC
CTGACGGCGG TGATGGGCAA CGTGGCGCTG GCGGGACTCG ACGTGGATCC CGAGTCGGAG
GCCGCCCGCA GTCTGCGCGA AGCCGAGAAG GCTACGCTGC GGGCGCGCGA TCTCACGCAG
CAGCTGCTGA CCTTCGCGAA GGGCGGCGAA CCGGTGCGCG CGGCGGTGCA ACTGGGCGGG
ACCGTGCACG AGATCGTCAC GTTCACCCTG CACGGCTCGA AGGTGCGCGC GGCCTACGAC
ATTCCGGACG ATCTCTGGCC GGCCGACGTC GACAAGGGCC AGATCGGGCG CGTGGTTCAA
AACCTCGTGC TCAACGCGGT GCAGGCAATG CCGGAGGGCG GCACGGTGTC GATCGCGCTG
CGGAACGAGC GGATCGAAGG CTATTCGCAG GTGGCGCTGG CCCCGGGCGA CTATGTGCGG
ATTGCGATCG CCGACACGGG CGTCGGCATT CCGCCGGAAC ACCTGCCGCG GATCTTCGAC
CCGTATTTCA GCACGAAGCC GATGGGCAGC GGACTGGGGC TCGCGGCCGT TTACTCGATC
GTCAACAAAC ACCGCGGCGG CATCGACGTG AAGTCCCAAG TCGGCAAGGG CTCGACGTTC
ACCATCTGGC TGCCGGCGTC GCACGACCAG GCGGCGGACG AGAGTCCGAA CATGCCCGTG
ACGCGGACGA CGGTACTCAA GGGCCGCGTC CTCTTCATGG ACGACGAGGA GCCGATTCGC
GAGATGGCGG TGTTTCTGTT GCGCCGGCTG GGCATGGAGG TCGAATGCGC GGCGGATGGA
GCCGAAGCGG TGCACAAGTA CGAGGAGGCG CGGGCCGCGG GGAATCCGTT CGCGCTTGTG
ATCATGGACC TCACGGTGCC TGGCGGGATG GGCGGCCGCG AGGCGATCGG ACAATTGCGC
GCGCTCGATC CGAACGTGCG CGCGGTCGTA TCGAGCGGTT ATTCGAGTGA TCCGGTGCTG
GCGAACTATC GCGAGCATGG TTTCTGCGGC GTGGTGGCGA AGCCGTACGA AGTCGCGGAT
CTTGCGCGGG TGCTGCGCTC GGTGCTGGGC GGAAGCAACG GCGTGGCGGA ATAA
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| Protein sequence | MNLHPLRDIK AFGASPKGGG CVRAGLAAAL FAPVRSPAAE PVLAGFTGSG WWLAAALVVA
AAVVTWLITK AIGRRTAGQA GQLKSLLEFA NCLLWEARVE LQGDALKWDV SLQSTALAQQ
LFGHLPPRPD EGLWDRFEVP EREEMEARCR TALRERRSHY EHQFSFVREG RPVWLRESVT
VTPESGNRFH LVGLVTDVTR QRETELARRA SEERVRQLLS RSDCMLWEAR VRQDEAGAFH
WDWFIPKSEL YRRLVGEAGG PNRMPWDASI VPEYGEIEAR AKSAMREGRD GYEQEFRVVA
NNSVLWMHEQ VVVKALSPRE WMLQGVVIDI TVQRQAEESK RASEAQLQQV MGTADFLLWH
ARVFVGPDGR MQWVLNVPGS TLYRRLFGRD PQHPLALPWN QLVSADVYAQ MDARSAHAIK
TGAEGYEQEF PARRGSEEFW LREQATIRAV GPGEWQVVGI VTDATTRHLA EEARLASERA
LREILERAGC LLWRATVMRT EEGVRWTEFE MPASRLSTEI FGGRMPTRSD QLWDYAEVPD
LAQMNVVSTR ALLSGSQGYE QEFRAVQGDR LFWLHEQVAI TKTGPDEWHA VGVVTDVTQR
HLAQEAQRQS EVRLEELLRT ADCLIWQGEV SLRSDGTLEW VLYVPRSRLF RRIFGHDPQG
KVIRWDEVRV PELPEMQRTA RMALSSGHPG YEQVFHVPKP NGDIWVTEQV TISPAGPQRW
SVVGVITDIT ARREAEEARR TTEAQLQQIL ELADCMVWQA TITEHEDGEL DWKLFTPNSV
LYRRLFGDGE GEPEMGWDRL DVPEHAEMHE RATAAIRRRD PGYEQEFRVV LPQGVVWLRE
VVTVTGLDEH RFRLVGVITD ITAQREAQEA YRASVAQVEQ MLVAADCTLW QARVFEVAPR
QLRWVMFVPR SRLYRELFGR DPSPPAGLPW TEVTDAATRA EIDRHATEAI LGEQPAYEQE
FRAQRGARAF WLHEQVSITP IGPGEWRLVG VMTDMTARRE AEQAVRASEL RYRTLFQHMP
VAIIEIDFSE VGRWLASVRA RGITDLSAWL RAHPRELLRP ARLIRVLDCN DTAMDVLRAT
GPSDFRRRRM RLATPDMMEL VRSAILCLWD ERNTLEAEVE MRDFEGGLHE MNVRWWMELT
EEGLDFRQSV LVLVDLTELK QAEAALAAEK ERLAVTLRAM AEGVITTDVE GRVQFINDAA
VSFTQWEASA AIGRPVQEVC LLENDRTGER VEMPVARVGR GDVVMDLPPR TRLVRRDGAS
RLVEGCCAPI HSAVSKVIGT VFVFRDVTEH ERLEQELVRA TKLESVGILA GGIAHDFNNI
LTAVMGNVAL AGLDVDPESE AARSLREAEK ATLRARDLTQ QLLTFAKGGE PVRAAVQLGG
TVHEIVTFTL HGSKVRAAYD IPDDLWPADV DKGQIGRVVQ NLVLNAVQAM PEGGTVSIAL
RNERIEGYSQ VALAPGDYVR IAIADTGVGI PPEHLPRIFD PYFSTKPMGS GLGLAAVYSI
VNKHRGGIDV KSQVGKGSTF TIWLPASHDQ AADESPNMPV TRTTVLKGRV LFMDDEEPIR
EMAVFLLRRL GMEVECAADG AEAVHKYEEA RAAGNPFALV IMDLTVPGGM GGREAIGQLR
ALDPNVRAVV SSGYSSDPVL ANYREHGFCG VVAKPYEVAD LARVLRSVLG GSNGVAE
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