| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2443 |
|---|
| Symbol | |
|---|
| ID | 6207607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3143618 |
|---|
| End bp | 3145381 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692102 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase |
|---|
| Protein accession | YP_001819325 |
|---|
| Protein GI | 182414259 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.154054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.955997 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTA GCGTCAAAAA CGAATTCACG GTCCAAGGCA TCGCCGCCTC GCAGGGCATC
GCCTACGGCC AGATCTTCGT TTACATCCAG AGCGACGTCG AGGTGCCGAG TTATCAGGTC
GAACCGGAGA AGCGGATCGA GGAGGTCGCG CGGTTCGAGA AGGCGCTGCT GGTGACGCGG
CAGCAGATCG CAAAAATCCA GGACGAGGTG GAGCGCAACC TCGGACCCGA GGAGGCACTC
ATCTTCGATG CCCATCTGCT CGTGCTCGAA GACCAGGCGC TGATCGGCGA GACGATCCGC
GAATTCGAGA CCACGGGCCG CAACATCGAG ACCTGCTTCA ACAAAGTCTC GCAGCGCTAC
ATCAAGGCGT TCTCCGAAAT CGACGACGAA TACCTGCGCG AGCGCGCCGG CGACATCCGC
GACGTCGCGC AACGCGTGTT GCAGAACCTG CTCGGCCAGG CGGAGAACTC GCTCACGCGA
CTGGCCGACA AGCGGATCGT CGTGGCCAAC GACATCTCGC CCTCCGATTC CGCCAGCATC
GATCGCAGCG CGGCGCTCGG GATCGTCACC GACACCGGCA GCAAGACCAG CCACGCGGTG
ATCGTGGCGC GTTCGATGAA AGTGCCGGCG GTCGTTGGGC TGCGCGACCT GTCGCACCGC
GTGAAGCACG GCGACTGGGC GATCATCGAC GGCTACGATG GCGTGGTGAT TGTCAACCCG
TCGGAGAGCA CGCTCTTCCG GTACGGCAAG ATTCAGGAGC AGAAGAAGAC CTTCGAGAGC
CGGCTGCTCA AAGCCAACCA GGAGCCGGCG GTCACGCTCG ACGGCGTGCC CGTGACGCTG
ATGGCGAACA TCGAGAAGCC GGACGAGGTG AAGCTCGTGC GCGACTACAA TGCCGCCGGC
GTCGGGCTGT ACCGGACCGA GTATCTGTTC CTCAGCTCAT CCCGCGTGCC GAGCGAGCAG
GAGCAGTTTC TCGCCTACAA GGCCGTGGCG GAGGGCCTCG CGCCGAACCC GGTGGTGATC
CGCACGCTCG ATCTCGGCGG CGACAAGCCG ATGGCGGGCA ATCCGGAGCT GTTCCCGAAG
GAGGACAACC CGTTCATGGG TTTCCGGGCG ATCCGGTTCT GCCTCGAGCA CCAGGATATT
TTCCGCGACC AGTTGCGCGC CATCCTGATG GCGAGCGCCT ACGGGAAGGT GAAGATCATG
TACCCCATGA TCAGCGGGCA CGAGGAGCTC GCGCGGGCGA ATGCGGTTTT GGCGGATTGC
ATGAGCGACC TGAAGTCGCG CGGCGTGCCA TTTGATGAAA ACATCCCGGT GGGCGCGATG
ATCGAGGTGC CGAGCGCGGC CGAGACCGCG GATCTGCTGG CGCCGGATTG CGCGTTCTTC
AGCATCGGGA CCAATGACCT CATCCAGTAT ATCCTCGCGA TCGATCGCGT GAACGACCGG
ATTGCGCACC TCTACGAACC GACGCATTGC GCGGTGCTGC GAACGCTGCG GCGGATCGTC
GCCGAAGGTC ATCGCGGCAA GTTGGAGGTG AGCGTGTGCG GCGAGATGGC CGGGGATCCG
GTCTACGCGC CGCTGCTGCT GGGCATGGGC ATCGATTGCC TGAGCATGGC GCCGCCGTGG
ATTCCGTCGG TGAAATACAT CGTGCGGGCC ATGACCATGG CGGATGCGCG AGCGCTGGCG
GAAGAAGCGC TGCAGATGAA TTCGCCCCGC GAAATCTACG CCAAGTGCGA GGCGTTTTAC
CGCGCGCGCG TTTCAGTGGA TTGA
|
|---|
| Protein sequence | MDTSVKNEFT VQGIAASQGI AYGQIFVYIQ SDVEVPSYQV EPEKRIEEVA RFEKALLVTR
QQIAKIQDEV ERNLGPEEAL IFDAHLLVLE DQALIGETIR EFETTGRNIE TCFNKVSQRY
IKAFSEIDDE YLRERAGDIR DVAQRVLQNL LGQAENSLTR LADKRIVVAN DISPSDSASI
DRSAALGIVT DTGSKTSHAV IVARSMKVPA VVGLRDLSHR VKHGDWAIID GYDGVVIVNP
SESTLFRYGK IQEQKKTFES RLLKANQEPA VTLDGVPVTL MANIEKPDEV KLVRDYNAAG
VGLYRTEYLF LSSSRVPSEQ EQFLAYKAVA EGLAPNPVVI RTLDLGGDKP MAGNPELFPK
EDNPFMGFRA IRFCLEHQDI FRDQLRAILM ASAYGKVKIM YPMISGHEEL ARANAVLADC
MSDLKSRGVP FDENIPVGAM IEVPSAAETA DLLAPDCAFF SIGTNDLIQY ILAIDRVNDR
IAHLYEPTHC AVLRTLRRIV AEGHRGKLEV SVCGEMAGDP VYAPLLLGMG IDCLSMAPPW
IPSVKYIVRA MTMADARALA EEALQMNSPR EIYAKCEAFY RARVSVD
|
|---|
| |