Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2392 |
Symbol | |
ID | 6207536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3079047 |
End bp | 3080138 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641692051 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001819274 |
Protein GI | 182414208 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.895701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGGC GCACGCGTTT CACCCAACGC CTGGGCATCG ATTATCCGAT TGTCCAGGGT CCCTTTGGCA GCGGCCTGTC GAGCACGCGA CTCGCCGCAG CCGTCTCGAA CGCCGGTGGG CTGGGCTCCT ATGGCGCGCA CATCCTCGGT CCCGAGGAAA TTCGCGCCAC GGTGGCAGAG CTTCGCACCC GGACCGGGCG GCCGTTCAAC CTCAACCTGT GGGTTCCGCT GCCGGGTGAA GCTGCCCTGA CGTTGACCGA GAGCGAATTT GCCGCGGAAT CAGCGCGGTT CGCATCCGCG CGGGCGGAGT TCGGTCTGCC GGCACCGACG GCGCCGGCGA CCTATGCGGC CGCCGATTTC AGCCGGCAAC TCGAAGCGGT GATCGAAGCA CGGCCGCCGG TGGCGAGCTT CGTGTTCGGG CCGCCGCCGC AGGCGGCGGT GGAGGAGATG AAGCGCCGCG GCATCGTCAC CATGGCGGCG GCGACCACCG TCGACGAGGC GGTCGCACTC GAACGCGCGG GGATCGAACT AGTCGTGGCC TCGGGCTCCG ATGCCGGAGG GCACCGTCCG TCTTTCCTGC GGGCCGCGGG TGAGTCGCTC GTCGGCACGT TCTCGCTGAT CCCGCAGATC GTCGATGCGG TGAGCGTGCC GGTGATCGCG GCGGGCGGCA TTGCCGATGG TCGAGGGGTG GCAGCGGCGC TGATGCTCGG GGCCGACGGC GCGCAGGTCG GCACGGCGTT CCTGGCCTGT GACGAGTCGA ACGCGAGCGA GGGGCACAAA GCCGAATTGG TGAAACCATC GGCGCGCTGG ACAAGCCTTA CGCGCGCCTA CACGGGGCGG CTGGCGCGCG GCATTCGCAC GCCGATGATG ATGGAACTGG AGCGCGACGC CGAGGTGCCG CCGTATCCGA TCCGTGCGTG GTTTACCTCG CCCCTGAGGA AAGCCGCGGC CAAAGCGGCC CGGCCTGAGC GGCAGGCGCT CTGGAGCGGC CAGGCGGCGG GACTGGTCCG GCGCCGCACG GCGGCGCAAT GCTTCGCCGC GCTGATCGAG ACCACGGAAC GGGCATGGCG GCGAAGCGCC GCGCCCAGCT GA
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Protein sequence | MWRRTRFTQR LGIDYPIVQG PFGSGLSSTR LAAAVSNAGG LGSYGAHILG PEEIRATVAE LRTRTGRPFN LNLWVPLPGE AALTLTESEF AAESARFASA RAEFGLPAPT APATYAAADF SRQLEAVIEA RPPVASFVFG PPPQAAVEEM KRRGIVTMAA ATTVDEAVAL ERAGIELVVA SGSDAGGHRP SFLRAAGESL VGTFSLIPQI VDAVSVPVIA AGGIADGRGV AAALMLGADG AQVGTAFLAC DESNASEGHK AELVKPSARW TSLTRAYTGR LARGIRTPMM MELERDAEVP PYPIRAWFTS PLRKAAAKAA RPERQALWSG QAAGLVRRRT AAQCFAALIE TTERAWRRSA APS
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