Gene Oter_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2279 
Symbol 
ID6206973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2943369 
End bp2944589 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content67% 
IMG OID641691934 
Producthypothetical protein 
Protein accessionYP_001819161 
Protein GI182414095 
COG category[S] Function unknown 
COG ID[COG4289] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.22671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC GAATCAAGAT TCTCCTCGGC TCGCTGCTCT CTCCCGTTCT GCTCGCCGCC 
GCCGACCTGC CGCCGGTCGG CGGAGACGGG CCGGCGCAGC GCGCGTATCA GGTGGCCGTG
CTGGCACGCA TCGCGGAGCC GGTGCTGGTC GCGGGGAGTG AGGGCCGGCT GCGGGTGCGT
ATCCCGCAGA TTGAAGGCGC GCGCAACCAG TACGCGCCGC TCGAGGCGCT CGGCCGGACG
CTCGCCGGCA TCGCACCGTG GCTCGAACTC GGTCCGGGCG ACGACGCCGA GGGCGCCTTG
CGCGCGCACC ACATCGGGCT TGCGGTGAAG TCGATCGCCC ATGCGGTCGA TCCGCAGTCT
CCGGGACATT TGAACTTCAC CGAAGGCGGA CAGCCGCTGG TCGACACGGC GTTTCTGGCG
CAGGCGCTGC TGCGCGCACC GCGACAACTC TGGGGCAATC TCAGCGACGC GGAGCGCGCC
CACGTCGTCG CCGCGCTCAA AGCCACCCGC GCGATCAAGC CTTACGAGAG CAACTGGCTC
CTGTTTAGCG CCATGGTGGA AGCCGCTCTG CTCGAGTTCA CGGGCGAATG CGAGTTGGCG
CCGATCGAGC GCGCCGTCAC GCGCCATCTC GAGTGGTATA AGGGCGATGG CACTTACGGT
GACGGGCCGG AGTTTCACTG GGATTACTAC AACAGCTTCG TGATTCATCC GATGCTGTGG
GAAGTGCTCG AGGTGGCTGG CCGGAAAAAC CTCCCGCTTG GCCAGCACTT CGCGCTCGAG
CAGAAGCGCG CGCAGCGTTA CGCGGAAGTG CTCGAGCGGA TGATTTCGCC GGAAGGCACG
TTTCCGATCA TCGGCCGCTC GTCGGCATAT CGCTTCGGCG CGCTGCACGC GTTGTCGATG
ATGGCGCTTC GCCACCACCT GCCGGAAACG GTGACGCCGG CGGGCGTGCG CGCGGCGCTC
ACCGCGGTGA TCCAGCGCAT GATCGAAGCC CCGGGCGCGT TCGATGACGC GGGCTGGCTC
CGGATCGGCG TCGTCGGCGC GCAACCGAAA GCCGCCGAGG TCTACGTCAA CACCGGAAGC
CTGTATCTCT GTACCTTTGG GCTGCTGCAA CTGGGCCTGC CCGCCGAGGA TCCGTTCTGG
ACCGAGCCGA ACCAATCGTG GACGCAGCAG CGGCTCTGGG CCGGCGAGAA TCTACCCGCC
GATCACGCGA TCAAGGAGTG A
 
Protein sequence
MSSRIKILLG SLLSPVLLAA ADLPPVGGDG PAQRAYQVAV LARIAEPVLV AGSEGRLRVR 
IPQIEGARNQ YAPLEALGRT LAGIAPWLEL GPGDDAEGAL RAHHIGLAVK SIAHAVDPQS
PGHLNFTEGG QPLVDTAFLA QALLRAPRQL WGNLSDAERA HVVAALKATR AIKPYESNWL
LFSAMVEAAL LEFTGECELA PIERAVTRHL EWYKGDGTYG DGPEFHWDYY NSFVIHPMLW
EVLEVAGRKN LPLGQHFALE QKRAQRYAEV LERMISPEGT FPIIGRSSAY RFGALHALSM
MALRHHLPET VTPAGVRAAL TAVIQRMIEA PGAFDDAGWL RIGVVGAQPK AAEVYVNTGS
LYLCTFGLLQ LGLPAEDPFW TEPNQSWTQQ RLWAGENLPA DHAIKE