Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2226 |
Symbol | |
ID | 6205756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2867094 |
End bp | 2867438 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641691881 |
Product | hypothetical protein |
Protein accession | YP_001819109 |
Protein GI | 182414043 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.282433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00277707 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCCAACTC AAACTGCCAA ACGACGGGCG CGAAGCGATG CGCGCGCCGG AAAGAAACCC AGCACGCAGG CGGGCGAGTT CGTCCGCGAA GAGATGCACC AGCTGAAGCG CGGCAAAGGC ACCGCGAAAT CGCGGAAGCA GGCGATCGCG ATCGGGCTCT CCGAAGCGCG CCGTTCCGGC GTGAAGCTCG GCACGCCGAA AAAAGGCAAG ACCTCGTCCG CCACGAGAAA GAAGGCGCAG CGCGACACCG CAGTCGGCCA GGGTCGGCGC AAGCCGTCGC CGACCCGCTC CCGCGGAGCC AAGAAGGCGG CGCGCACGCG TGCACGGCAG AAGCGCCGCT CGTAG
|
Protein sequence | MPTQTAKRRA RSDARAGKKP STQAGEFVRE EMHQLKRGKG TAKSRKQAIA IGLSEARRSG VKLGTPKKGK TSSATRKKAQ RDTAVGQGRR KPSPTRSRGA KKAARTRARQ KRRS
|
| |