Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2116 |
Symbol | |
ID | 6208302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2710847 |
End bp | 2711857 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641691768 |
Product | PilT domain-containing protein |
Protein accession | YP_001818999 |
Protein GI | 182413933 |
COG category | [R] General function prediction only |
COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.960962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGAA CGATCTACGC GATTCGCGCG GTTTTCTTCC TGCTCTGTGG CGCGGGCGGC TGGCTGGTGT GTTACGCGAT TCGCGAATGG GACGAGTATC GGGCGCTGGC GATGATGATC GGTTTCCTGA TCGGCGCGCT GATCATCCTC ATCGATGTGC TGCTGAAAGG ATTTTCACTG CGGGGGCTTT CGGCGATGAC GTTTGGGTTG GCGATCGGCA CGCTGATTTC GTACCTGATC GGTTCGTCGC CGTTGTTTCG CTTCGGCGAT CTGCAGACGA TCTACCTGTT TCAATTGGTG CTGTTCATCG TCTGTACCTA CCTGGCGACG GTGATCGCGC TGCGCGGGAA GGACGAGTTC AACCTGGTGA TTCCTTATGT GCGTTTCGTG CCGCACGAAG TCGACGTGCC GTTGGTGGTG GTCGACACGA GCGCGCTGAT CGACGGACGG ATCTCGCGGG TGTGTGAGGC GGGGTTTCTC AACGCGGCGC TGGTGATTCC GCGGTTCGTC CTCAATGAGC TGCAGGCCGT GGCCGACTCG ACCGAACCAC ACCGGCAGGC CCGGGGTCGG CGGGGCCTCG AAGTGTTGAA CGAGCTGCGT CGGATCAAGC ACATCGATAT TCGCATTCCC GAAAGCGAGG TCACGAAGCG CACGGATGTG GATGCGAAGC TCGTGTTTCT CGCGCAGTCG ATGCGCGCGA AGCTGCTCAC GACGGACTTC AATCTCGCGA AGATGGCGGA GTTCCACGGT GTGCCGTGGC TGAACCTGAA CGATCTCGCG AAATCGCTGC GGCCGGAAAT CACGCTGGGC CAGTCGGTCG AGGTGGAGCT CGTGAAACCG GGCAAGGACG AAGGGCAGGC GGTCGGCTAT CTCGAAGACG GCTCCATGGT GGTGGTGGCG GAAGGTCGGT CCTTTATCGG TCACCGCGTG AACGCGGAGA TCGTCAGCGT GTTGCCGACG GCGGGCGGCA AAATGGTGTT CGCGAGGCTG GTGAGCGCTG CGGCGGCATA G
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Protein sequence | MRRTIYAIRA VFFLLCGAGG WLVCYAIREW DEYRALAMMI GFLIGALIIL IDVLLKGFSL RGLSAMTFGL AIGTLISYLI GSSPLFRFGD LQTIYLFQLV LFIVCTYLAT VIALRGKDEF NLVIPYVRFV PHEVDVPLVV VDTSALIDGR ISRVCEAGFL NAALVIPRFV LNELQAVADS TEPHRQARGR RGLEVLNELR RIKHIDIRIP ESEVTKRTDV DAKLVFLAQS MRAKLLTTDF NLAKMAEFHG VPWLNLNDLA KSLRPEITLG QSVEVELVKP GKDEGQAVGY LEDGSMVVVA EGRSFIGHRV NAEIVSVLPT AGGKMVFARL VSAAAA
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