Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2045 |
Symbol | |
ID | 6207765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2624901 |
End bp | 2626295 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641691695 |
Product | Alpha-L-fucosidase |
Protein accession | YP_001818928 |
Protein GI | 182413862 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.118416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.344897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTTA CCCCACGCTC GTTGCTCACT TCGCTCTCCT GGTTGCGCCT GACCGGCGCG CTCGTCGCTG CGACGATTCT CGGTATCGTG GTCCGCGCCG CCGAACCCTC AACGCCCATG ATCACCGACC GGCCGGACAT GACTTGGTTT ACCGACGCAC GGCTCGGGAT CTTCATCCAC TGGGGCATCT ACTCCGAAGG GAAGGGGAGC GAGTCCTGGG CGTTCCACGA CGGTCAGATG CCTTACGACG AATACATGGC GCAGGCGAAG ACCTTCACCG CCGCCAAGTA TGATCCCGCG CACTGGGCCG AGCTTTTCAA GGCCGCGGGC GCACGCTACA CCGTGCTCAC CTCGAAGCAT CACGATGGCT TCGCGCTCTG GGACACGAAA CAAAGCGCGC TCAACGCGAA AGACGGCGCG CCAGCCGGTC GCGACTTGAT CGGGCCTTAC TGCGAGGCGA TGCGCGCGCA GGGGCTGAAG GTCGGACTGT ATTTCTCGCA CCTCGACTGG TCGCATCCCG ACTACGCGAG CGTGTTCAAT GCGGCGGGCG CGAACGACCC GGCCGGGCGG AAGAACCGTT TCTCGTACCC GCAGGGTCCG GAAAATCCGG CAGCCTGGGA GCGGTTTCTT GCGTTTCACC GGGCGCAGCT ACGCGAGATC ACGGAACGGT TTCACCCGGA TCTGCTGTGG TTCGACGGCG ATTGGGAACG CTCCGCGGAG CAGTGGCGGA TGAAGGAGCT GCGGGCGCAG CTGAAGTCGT GGCTGCCCGA CGTGATTCTC AACAGTCGCA TGCAGGGCTA CGGCGACTAC GCGACGCCGG AGCAGGCGCT GCCGGTGCGG CCGCCGACCG GCCCGTGGGA GCTGTGCATG ACGATCAACG ATTCGTGGGG CTACCAGGCG AAGGACCGGA ATTTCAAAAC CGTGCGGCAA ATCGTCCGAC TGCTCACCGA GTGCGCGTCG CAGGGTGGCA ACCTGCTGCT CGACGTCGGA CCGCGCAGCG ACGGCACGAT CACACCCGAA CAGGAGCAGA TTTTGCGCGC GCTGGGTCGC TGGACATCGA AGCACGCGGG GGCGCTTTAC GGCACGACCG CGGGAATTCC GAAGGACTAC TATTACGGAC CGAGTCTGCT GAACAAAGCG CGCGATGTGC TTTATCTCGT CTGCTACGAC CGGCCGGTGG ACGGGCTGTA TGTGAAGGGT ATCCGCAACC CGGTGAAACG TGCGAGCGTG GAGGGCGGAG GGGAGCTGAC GCACCGCAGG TTCATGAAGG CAGAGTGGGC GCATCAGCCG GGGATTGTGA TCGTCGATTT GCCGGAGGAA GCGGCGGACC CGGACGCGAC GATTGTTCGG CTGGAACTGG ACGGCCCGAT CGAATTGCTC GAGCCGGGCA CGTGA
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Protein sequence | MAVTPRSLLT SLSWLRLTGA LVAATILGIV VRAAEPSTPM ITDRPDMTWF TDARLGIFIH WGIYSEGKGS ESWAFHDGQM PYDEYMAQAK TFTAAKYDPA HWAELFKAAG ARYTVLTSKH HDGFALWDTK QSALNAKDGA PAGRDLIGPY CEAMRAQGLK VGLYFSHLDW SHPDYASVFN AAGANDPAGR KNRFSYPQGP ENPAAWERFL AFHRAQLREI TERFHPDLLW FDGDWERSAE QWRMKELRAQ LKSWLPDVIL NSRMQGYGDY ATPEQALPVR PPTGPWELCM TINDSWGYQA KDRNFKTVRQ IVRLLTECAS QGGNLLLDVG PRSDGTITPE QEQILRALGR WTSKHAGALY GTTAGIPKDY YYGPSLLNKA RDVLYLVCYD RPVDGLYVKG IRNPVKRASV EGGGELTHRR FMKAEWAHQP GIVIVDLPEE AADPDATIVR LELDGPIELL EPGT
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