| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2010 |
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| Symbol | |
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| ID | 6206641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2586571 |
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| End bp | 2588937 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691660 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001818893 |
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| Protein GI | 182413827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.680457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA CCAAAGTGTG GAAAGGCCAC TCGTATCCGC TCGGCGCCAC CTGGACCGGC
TCCGGCGTCA ACTTCAGCCT CTTTTCCGAA AACGCCACCG GCGTGGAGCT GTGCCTCTTC
GACCAGCTCG GCGAGCCGGA GACCGCGCGG ATCAAGCTCA CCGAGCGCAG TGATCAGGTG
TGGCATTGTT TTCTGCCGGA GATCCGGCCC GGCCAACTCT ACGGCTATCG CGTCGACGGT
CCCTACGAGC CGCTCAAGGG CCATCGGTTC AACCGGAACA AGCTCCTGAT CGACCCCTAC
GCGAAGGCGA TCGCGGGCCA AGTGCAGTGG TCGGACGAGA TGTTCAGCTA CACGATCGGG
CACGCGGACG GCGATCTCTC GTTCGATGCG CGCGACAACG CCGTGCTGAT GCCGAAGGCG
GTCGTGGTCA ACCCGGTGTT CGCGTGGGGC GGCGACGTAC GGCCGGACCG GGCCTTTCAT
GAGACGGTGA TCTACGAGAC CCACGTGAAG GGTTTCTCCA AGCTCTGGGA AGTGCTGCCG
GAGCACCTCC GCGGCACCTA CGCGGGGATC GGCAGCCCGC ACGCGATTGA GTATTTCAAG
AAACTCGGCG TGACCGCGAT CGAGCTGATG CCCGTGCATC AGCACGTGAC ATCAAAGCAT
CTGCTCGACA AGGGGCTGAG CGACTACTGG GGCTACAACA GCCTCGGGTT TTTCGCGCCG
GAGCCGACCT ACAGCAGTGA AAACGGCAAT CGCGGCGCGG AGGTCGATGA ATTTCGCGCG
ATGGTGCGCA GCCTCCACGC CGCCGGGCTC GAGGTGATCC TCGACGTGGT CTACAACCAC
ACCGCCGAGG GCAATCACCT CGGGCCCACG CTCGGGTTCC GCGGCATCGA CAACGCGAGC
TATTACCGGC TCACCGCGGA CAATCCGCGC TACTACATGG ATTATACCGG GACCGGCAAC
ACGCTGAACG TACCGAATCC ACGCGTGCTG CAGCTCGTGA TGGACAGCCT GCGCTACTGG
GTGCTCGACA TGCACGTCGA CGGCTTCCGC TTCGACCTCG CCACCGCGCT AGCCCGCGAA
CTCCATGAGG TCAGCCGGCT CTCATCGTTT TTCGACGTCA TTCACCAGGA TCCCGTGCTC
TCCCAGGTGA AGCTGATCGC GGAGCCGTGG GATGTGGGCG AGGGGGGCTA CCAGGTCGGC
AACTTCCCGG TGCTGTGGGC GGAGTGGAAC GGCCGCTACC GCGATACCGT GCGCCGCTAC
TGGAAGGGCG AGTCCGGCCA CATGCGCGAT TTCGCCTACC GGCTGTGCGG CAGCTCCGAT
CTTTACCAGA GCAGCGGCAA AACCCCGACG GCGAGCATCA ACTTCATCAC CTCGCACGAC
GGCTTCGCGC TGCGTGATCT GGTTTCGTTC AACGAGAAGC ACAATGAAGC GAACGGCGAG
AACAACCAGG ACGGCGACAA CAACAACAAC TCCTACAACT GGGGGTACGA AGGCCTCGAT
GCGCCGGAGG AGATCCGCGC GCTGCGGCGG CGGGTGAAAA GGAATTTCCT GACCACGCTG
TTGCTCTCGC AAGGCGTGCC CATGCTCCGC GGCGGCGATG AGGCGGGCGC AACGCAGCGC
GGCAACAACA ACGCGTATTG CCAGGACAAC GAGATCAGCT GGATCAACTG GAAGCTGCCG
CCGCCCGAAC AGCAGCTGCT GGAGTTTACC TCGCGGCTGA TCCAGTTCCG GCTGCAGCAT
CCCATCTTTC ACCAACCGAA CTTTTTCAAA GGCCGCGATC TTCGCGGCAC GGGGGTGAAG
GACATCACTT GGTTCTATCC CGACGGCTCG GAGATGGACG ACGAGGGCTG GAGCGCCGAC
TTCGCGAAAG TTCTCGGATT CATGTTGAGC GGCCGCTCGA TGGACCTGCG TTCGTATTTC
GGTGAGCCAA TCACGGACGG CACGTTTCTG CTTTATTTCA ACGCGCACGA TGGCGAGGTC
GAAGTGACGC TGCCGGGCCG GCCGAACGTC GGCTGGCGCC GGATTCTCGA TACCACGGAT
GAGGCCGGGT TCATCGAATC GCCGCGGTTG CGACAAGGCG GGAGCAAGCA TCAGCTCACC
GCGATCTCGC TGGTGCTGTT CCAGCAGGAA ACCGGTACCG ACGAGGAAGC GCGGAATCCG
TGGGAGAAGA TCGGCGGCCG CGGCCTCCCG CCGCGGAAAG GACCCACGAC TTCGCCGTTT
GCTGCGTCGG GCGTGCCCGC GCCGGCGGGA CCTTCCGCCA CGACGCCGAT TTCGATGCCG
AACCCCGCGC GCGTCCCGGG CTCGTCGGGG GAAGCGCACC GCGCTCCGGA TCTCGCGCCG
GCGATCCCGC CGAAACCAAC GCCTTGA
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| Protein sequence | MKPTKVWKGH SYPLGATWTG SGVNFSLFSE NATGVELCLF DQLGEPETAR IKLTERSDQV
WHCFLPEIRP GQLYGYRVDG PYEPLKGHRF NRNKLLIDPY AKAIAGQVQW SDEMFSYTIG
HADGDLSFDA RDNAVLMPKA VVVNPVFAWG GDVRPDRAFH ETVIYETHVK GFSKLWEVLP
EHLRGTYAGI GSPHAIEYFK KLGVTAIELM PVHQHVTSKH LLDKGLSDYW GYNSLGFFAP
EPTYSSENGN RGAEVDEFRA MVRSLHAAGL EVILDVVYNH TAEGNHLGPT LGFRGIDNAS
YYRLTADNPR YYMDYTGTGN TLNVPNPRVL QLVMDSLRYW VLDMHVDGFR FDLATALARE
LHEVSRLSSF FDVIHQDPVL SQVKLIAEPW DVGEGGYQVG NFPVLWAEWN GRYRDTVRRY
WKGESGHMRD FAYRLCGSSD LYQSSGKTPT ASINFITSHD GFALRDLVSF NEKHNEANGE
NNQDGDNNNN SYNWGYEGLD APEEIRALRR RVKRNFLTTL LLSQGVPMLR GGDEAGATQR
GNNNAYCQDN EISWINWKLP PPEQQLLEFT SRLIQFRLQH PIFHQPNFFK GRDLRGTGVK
DITWFYPDGS EMDDEGWSAD FAKVLGFMLS GRSMDLRSYF GEPITDGTFL LYFNAHDGEV
EVTLPGRPNV GWRRILDTTD EAGFIESPRL RQGGSKHQLT AISLVLFQQE TGTDEEARNP
WEKIGGRGLP PRKGPTTSPF AASGVPAPAG PSATTPISMP NPARVPGSSG EAHRAPDLAP
AIPPKPTP
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