| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1946 |
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| Symbol | |
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| ID | 6208396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2441569 |
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| End bp | 2442465 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691594 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001818829 |
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| Protein GI | 182413763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.394231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTACC TGAAGACAAG TTATCCGGTG AGCAGGACAC GGGCGTGCGG GCTGCTGCGT
TTGGCCGTGA GCAGCTACTA CTACCAGTCA CACGGCCGGC GTGATGAGTT GCCCGTGCGG
AGCGCCTTGC GGCGCCATGC CGTGGTGCGT CGACGCTGGG GCTATCGTCG GTTGCTGGTG
CTGCTGCGCC GGGAAGGTAT CGCTGATAAT CACAAGCGGG TGTATCGGCT CTATCGGGCC
GAAGGCTTGC AGGTGCGGCA GCGACGCCGG CGCAAACAAC GACTGGCTCG TGGCGTCGAA
GCGGTCGCCG CGCCACAACG GCCGAACGAA CGCTGGAGCT TGGACTTCGT CCACGACCGG
CTGGCCAACG GGCGCTCGTT ACGCCTGCTC ACCGTGCATG ACGACTACAC CCGCGAGTGC
CTGTGGATCG AGGCCGACAC CTCATTGTCC GGGCCGCGGG TGGCACGCGT GCTCGACTAT
CTCACCGAGT TGCGCGGCCG ACCCGGCAGC CTGCTCACCG ACAACGGGCC GGAGTTTGCC
GGCCTGGCAC TCGAGCGCTG GACGCACGAG CGACAAGTGA ACCATCGCTT CATCACGCCA
GGAAAGCCGT CCCAGAACGG CTACATCGAA AGCTTCAACG GCAAGCTCCG CGACGAGTGC
CTCAACGAAA CCGAGTTTCT TTCGGTCAGC CATGCCCGCG ATCTGCTCGA AGCGTTCCGC
GAAGACTACA ACCACCAACG ACCGCACAGC TCACTCCACG ATCTGACGCC GGCCCAGTTT
GCGGCCAAAA TCGCGCGAGC CCCCATGGGG GCTCCTGTGG ACCTGATCAA CCCTCCGCTT
GCAGTCCCAA CCCTCGTCAG TAAACCAACC TCAACCGATC CGGTTCTCTC GTTTTAA
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| Protein sequence | MDYLKTSYPV SRTRACGLLR LAVSSYYYQS HGRRDELPVR SALRRHAVVR RRWGYRRLLV
LLRREGIADN HKRVYRLYRA EGLQVRQRRR RKQRLARGVE AVAAPQRPNE RWSLDFVHDR
LANGRSLRLL TVHDDYTREC LWIEADTSLS GPRVARVLDY LTELRGRPGS LLTDNGPEFA
GLALERWTHE RQVNHRFITP GKPSQNGYIE SFNGKLRDEC LNETEFLSVS HARDLLEAFR
EDYNHQRPHS SLHDLTPAQF AAKIARAPMG APVDLINPPL AVPTLVSKPT STDPVLSF
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