Gene Oter_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1931 
Symbol 
ID6206002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2427838 
End bp2429214 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content66% 
IMG OID641691579 
ProductPectate lyase 
Protein accessionYP_001818814 
Protein GI182413748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.24321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCG GCGACCCCGG ATCCGGCGTG GCGAACGGCC TGCGGATCAT GTGTGTCGCC 
ATGCTCACGC ACGCGGCGGT CGCCGCGGAG TTCTACGTCG CGCCGGACGG GCGGGACGCG
AATCCCGGCA CGATCGAAGC GCCCTTCGGC AGCGTGCAAC GGGCGTCGTC GGCGGCGCGT
GCCGGCGACA CCGTGTTCAT CCGCGGTGGC ACCTACGTGA TGAGCGAGGC CCAGATCGCC
GGCCGGGACG GCCCGTATGC CTGCGTCGTC ATGTTCGAGC GCAGCGGCGC GCCGGGCCGG
CCGATTCGGT ACTGGGCGTA TCCCGGTGAA CGACCGGTGT TCGACTTCTC CCACGTCAAA
CCGGCGGGGC GGCGGGTGAC GGCGTTTCGC GTGAACGGCT CGTGGCTCCA TCTGCGCGGG
CTCGAGGTGG TCGGCGTGCA GGTGACGATC AAGGAGCACA CCCAGTCGAT CTGCTTCGAC
AATCGCGGCA GTCACAACGT CTACGAGGCG CTCAGCCTGC ACGACGGCAT GGCGATCGGA
CTGTGGATCG GCGGCACGGC TAGCCACAAT CTCGTGCTGA ATTGCGACGC CTATCGGAAT
CACGACCCGG TGTCGGAGGA CGGACTGGGC GGCAATGTCG ATGGGTTCGG CTACCACGGC
AAGAAAGGGA GTGTCGGCAA CGTGTTCCGC GGCGGCCGGG CCTGGTTCAA CAGCGACGAC
GGCTTCGATT TCATTCACGC CGAGGAAGCG GCGGTGATCG AGGGCTGCTG GGCCTTCTAC
AACGGCTACT CGCCCGAGTT TCGTTCGCTC GCCAACGGCA ATGGGTTCAA GGCGGGCGGA
TTTTCGCGCA CGCCGGTCGA TCGGCTGCCC GATCCGATTC CGCGCCATGT GGTCCGACGC
AGCTTGGCGG TGCGGAACAA GGCGAACGGG TTTTATGCGA ATCACCACGT CGGCGGACTC
GATTTCATTC ACAACACCGG CTACCGAAAC CGCGTGAACT TTAACCTGCT CGGTCGTGAA
CCGTCGGACA ACACGACGCT GATCGATGGC CGCGGGCACC GGTTGAAGAA CAATCTCGGG
TTTGCGGCGC GGGAGAACGA GGTCGCGCGG CTCGATCTCC AGCGGAGCGA CGCGAGCGGC
AATTCGTTCA CTCTGCCCGT GGAAATCACC GCGGAGGATT TTCTGAGCGT CGACGAGGCG
GAACTGACGA AGCCGCGGCA GCCGAACGGC GACCTTCCGA GGGTCCGTTT TCTGCACCTG
GCGCCGGGCA GTGATGCGAT CGACGCTGGT GTGGATATCG GCCAGCCGTT CAACGGCGCG
GCTCCCGATC TGGGCGCGTT TGAGGCGCTG CAGCCTCCGA TTACGGCACC CCACTAG
 
Protein sequence
MRLGDPGSGV ANGLRIMCVA MLTHAAVAAE FYVAPDGRDA NPGTIEAPFG SVQRASSAAR 
AGDTVFIRGG TYVMSEAQIA GRDGPYACVV MFERSGAPGR PIRYWAYPGE RPVFDFSHVK
PAGRRVTAFR VNGSWLHLRG LEVVGVQVTI KEHTQSICFD NRGSHNVYEA LSLHDGMAIG
LWIGGTASHN LVLNCDAYRN HDPVSEDGLG GNVDGFGYHG KKGSVGNVFR GGRAWFNSDD
GFDFIHAEEA AVIEGCWAFY NGYSPEFRSL ANGNGFKAGG FSRTPVDRLP DPIPRHVVRR
SLAVRNKANG FYANHHVGGL DFIHNTGYRN RVNFNLLGRE PSDNTTLIDG RGHRLKNNLG
FAARENEVAR LDLQRSDASG NSFTLPVEIT AEDFLSVDEA ELTKPRQPNG DLPRVRFLHL
APGSDAIDAG VDIGQPFNGA APDLGAFEAL QPPITAPH