| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1894 |
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| Symbol | |
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| ID | 6206403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2370633 |
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| End bp | 2373041 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691542 |
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| Product | permease |
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| Protein accession | YP_001818777 |
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| Protein GI | 182413711 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.180891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG CGTTTCGCTC GCTGGCAAAG TCCCCCGGCT TCACCGCGAT CGCTCTCCTC
ACCCTCGCGC TCGGGATCGG CGTGAACACG TCGATGTTCA GCCTCCTGGA ATCGTTGCTC
CTGCGCCCCG CGCCGTTCCC GCGTAGCACC GAACTCCATC AGATCATCGC CAACACGCGG
CAGGGCGCGC GCTATCAATT CTCCGAGGTC GAGACCCGCG AGATTCGCGA ACGCATCAGC
TCGTTCAGCT CCGTCACCAC CTTCCGGTAC AACCAGACGG CGCTCGCCGA ACCCGGCCGT
CCGGCCGAGC GCGTGCTCAG CATCCTCGTT TCCGCCGAGT TCTTCGATAC CTTCGGCGTT
CAGCCGATCG TCGGCCGCGC CTTCACCGCC GACGAAACCC GGCCCGGCAA CAACCAGGTC
ATCGTCCTCA GCCACCGCTT TTGGCAGCAG CGCTTCGCCG GCTCCCGCGA CGTCATCGGC
CGCACGCTTC GCCTCGACGG CGAGACCGTC ACCATCATTG GCGTCATGCC CGCCAGCTTC
GACTGGCGCT TCCTTTGGGG CATGGCCGGG TTCTGGCGGC CCATCAACTA CAGCCCCGAT
CAGCTCAACA GCCGCACCTA CCGCACGTTC AACCTCGTCG GCCGGCTCCG CCCCGGCATC
ACTCCGGAAC AGGCCGTCGC CGAACTCGGA CCCGTCGCCG CCAATCAGCT GAAGGATTTC
CCGAAGGACT ACAACGACCT CTCTTATCGC GTCACCGTCC TCCACAAAGC GCAGATGGAC
GACACGAGTC GTCAAATCCT CTGGATGCTT CTGGGCCTGT CCGGCTTCGT GCTGCTGATC
GCCTGCGCCA ATCTCGCCAA TCTCCAGCTC GCGCGCGCCA CCACCGCGAT GCGCGACCTC
GCCATCCGTG CCGCGCTCGG CGCGTCCCGC GCGCGGCTGA TCCGCGACCA GCTCGTCGAA
TGCCTGATGC TGTCCCTCGC GGGCGGTGCG CTCGGCATTC TTTTCGCCTA CTGGATCAAT
CGCGCCCTCA GCGCCAGCAT CCGTATTGCC GGCGAACCCG ACGGGCTCGG GCTGCAGCTC
CAAGGCTCCG TCCTGCTCGT CACCTTTCTC GTCGCCACGG CCACGGGCGT GCTCTTCGGC
ATTGTCCCCG CCTGGCTGTC CTCGCGCGCC GATGTCGTCG ACGCCCTCAA GTCCCAATCG
CGCGGCTCCA CCTCCAGCCG CGGCCAGCAC CGCATGCGAC AGGCGCTCAT CGTCGCCGAG
GTCACCCTCG CCCTGGTCCT CCTCGGTGGC GCTGCCGTCA TGCAGCGCGG CTTCGCGAAG
TTCGTCCAAA AGGATCCAGG CTGGGATACC GCCCGGCTCC TGACCGGTAC CCTGCCGATG
CCGGAAAAAC GGTTTCCCCA ACCCGCCGAC CGCATCGAAT TCCATCGCAA AGTCCTCGCC
CGGCTCGCCG CGCTGCCGGG CGTCGAGGCC GCGGCGCTCG CGACGGGCGT GCCGATCTGG
GGCTACGGCA CGGACCGCCA GATTCACACC GAAAAGCAGG ACGCCTCCGA TACCCGCAAC
CTCCCGCTCG CGAGCCACGT GATGATCACA TCCGATTTCT TCAACGTCCT CGGCGTTTCG
TTGCTTGAGG GTCGCATGTG GCCCGCCGAC ATCAAGCCCG ACGACCCCAA GGTGATCGTC
ATCAACCAAT CCCTCGCCCG CCAGCTCTGG CCCAACCAAA GCGCGGTCGG CCAGCGTCTC
GCGTCCATCA ATGGCGCCGA AAACACCTGG AGCGAAATCA TCGGCGTCGT CCGCGATGCC
GATTCGCCCG GAGAGATCGG CAATCCGAGC ACGCCTTACC AGGTGTTCCG GCCCCTCGTG
CACGAACCGT GGAGCTGGGT CCGCTTCGCG ATTCGCGCCC CTGCGCCCGC CGCGCTGGTC
GAAAGCGTTC GCCGTGCCAT CGCCGAGGTC GATCCCGACC TGCCCGCCGA CGAAGTGTTG
ACGGTCCCCC AGGCCCTCGA TCGCTCCAAT CACAACCTCG TCATCGTCGC CCGGCTCCTC
ATCGGCTTCG CCCTGCTCGG CCTCGTCCTC GCCGCCGTCG GGCTCTACGG CGTCATCTCC
AATCTCGTCG CCCAGCGCAC GGGCGAGTTC GGCATCCGGC TCGCGCTCGG CGCCAGGCCC
TCCGACGTCC TCCAACTCGT CCTGCAGCAC GGGCTGCAGC TTACCGCGAT CGGACTGCTC
CTCGGATTCG CGGGCGCCTA CGGGGTCAGC CGGCTGCTCA ACGCGATCAT GCCGCGAATG
GTCAGCCCCG ACACGCTCGC GCTTTCCGGC ATGGCCGCGC TCCTCTTCGT CGTCGCGATC
CTGGCAAGCT GGTTCCCCGC CCGCCGCGCG ACGAAAGTCG ACCCGCTGAT CGCGCTGCGG
GCAGAGTAG
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| Protein sequence | MKHAFRSLAK SPGFTAIALL TLALGIGVNT SMFSLLESLL LRPAPFPRST ELHQIIANTR
QGARYQFSEV ETREIRERIS SFSSVTTFRY NQTALAEPGR PAERVLSILV SAEFFDTFGV
QPIVGRAFTA DETRPGNNQV IVLSHRFWQQ RFAGSRDVIG RTLRLDGETV TIIGVMPASF
DWRFLWGMAG FWRPINYSPD QLNSRTYRTF NLVGRLRPGI TPEQAVAELG PVAANQLKDF
PKDYNDLSYR VTVLHKAQMD DTSRQILWML LGLSGFVLLI ACANLANLQL ARATTAMRDL
AIRAALGASR ARLIRDQLVE CLMLSLAGGA LGILFAYWIN RALSASIRIA GEPDGLGLQL
QGSVLLVTFL VATATGVLFG IVPAWLSSRA DVVDALKSQS RGSTSSRGQH RMRQALIVAE
VTLALVLLGG AAVMQRGFAK FVQKDPGWDT ARLLTGTLPM PEKRFPQPAD RIEFHRKVLA
RLAALPGVEA AALATGVPIW GYGTDRQIHT EKQDASDTRN LPLASHVMIT SDFFNVLGVS
LLEGRMWPAD IKPDDPKVIV INQSLARQLW PNQSAVGQRL ASINGAENTW SEIIGVVRDA
DSPGEIGNPS TPYQVFRPLV HEPWSWVRFA IRAPAPAALV ESVRRAIAEV DPDLPADEVL
TVPQALDRSN HNLVIVARLL IGFALLGLVL AAVGLYGVIS NLVAQRTGEF GIRLALGARP
SDVLQLVLQH GLQLTAIGLL LGFAGAYGVS RLLNAIMPRM VSPDTLALSG MAALLFVVAI
LASWFPARRA TKVDPLIALR AE
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