| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1876 |
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| Symbol | |
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| ID | 6206008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2332305 |
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| End bp | 2334719 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691524 |
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| Product | permease |
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| Protein accession | YP_001818759 |
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| Protein GI | 182413693 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG ATCTGAAATT CGCGTTCCGT CAGCTGCTCA AGTCGCCCGG CTTCACGATC
GTCTCGGTCC TCACGCTCGC GCTCGGCATC GGGCTGAACA CCTCGATGTT CAGTCTGCTG
GATACGCTGT TGCTGCAGCC GCTGCCGTTT CCCGACAAGC CACACCTCGT CCGGATCTAC
CGTACGACGC CTCAGTCGCA GACCGCCAAT CACACCGTCC CCGACTACCT CGAGTTGGAA
CGCGAAGCGG CGGATTTCGC CACGCTCGCT GCCTACCAAG CCTGGGGCAT GACCCTCGAG
CAGCCTGATC GGCCGTCGGT CAACCTCATT GCCCTGCGCG TCACCGCCAG CTTCTTCCCG
GCGCTCGGTC TGCAACCTGA ACTCGGCCGA TATTTCACCG CCGACGAGGA CCATCCTGGC
AACCGCGCGG TCATGCTGAG TCACGCGACG TGGCAGGCCC AGTTCGGCGG CGACCCGGCC
GTGATCGGCC GGACGGTGCG CATCGACGGC GAGCCCTGCA CGATCGTCGG CGTCATGCCC
GCGCGCTTTG CCTCGGTTTT CCTGTGGGGA CCGGCCCAGG CATTCCGGCC CTATGCCTTT
TCCGACAAGG AGCGCGTGGA CCGCGAAGAT ACGCGGGTGC AGATCCTTGG TCGCTACCGC
ATCGGCTTGT CGCTCGAACA GCTGAACGCC CGGTTCGCTG CGCTGGCGGT GCGGCTCGCG
CCCCTGCGCC CGAGCACGCA AAGCGAGGAC GGTCTGCGTG CCGTGCCGCT GCAATCCACC
GTGAGCAATC CCGCCACGCT CGGCATTTCG CTGCTCCTTC TCGGGCTCGC CGGCTTCGTC
CTCGTGATCG CGTGCTCCAA TCTCGCGAAC CTCCAACTCT CACGCGCGAT TGCCCGCGCG
CACGAGTTTG CGATCCGTGC GGCGCTCGGT GCTTCCCGTC GCCGGCTCCT GCTGCCGCTG
CTGTGTGAAA GCGTGCTGCT GTCCGTCGCC GGCGGCGGCT GCGGCGTGCT CGTCGCCGCC
TGGTCCAACG AGTGGATCTC CAGTCGGCTT TCCGCCAACG GCTTCGTCGC GTTCACCCTC
GAGCTCGACT GGCGCGTCCT GAGCTTCGCC CTCGCCGTTT CGCTGCTCAC CGGCATCGGT
TTCGGGCTCG TGCCCGCATG GCTGATGGCC CGAGTCCGCG TGAATGACAC CCTCAAGACT
GGCACGCGCG GCAACACCGG CGGCCGCGCC CAGAACCGGA TGCGCCACGC CCTCATCGTC
GCACAGTTCA GCCTGGCGCT GGTGCTGCTC GCCGGTGCCG GCCTGTTCAT CCGCGGGATG
AACCGCATGC TTGTCCGCGA TCTCGGCTGG AATCACGACG GCGTGCTGCA GGTGGTCCTC
AACCTGCCGG AGGCCCGCTA TCCCACCGGC GCCGAAACCC TCTCGTTCTA CACGCGGCTG
CAGGAACGCG TCGCCGCATT GCCCGGGGTC GACGACGTCG CGGTCGGCTG GACGCTGCCC
GTATTCCAGT TTCTCACCAG CCGGAACTAC CTCGTCGAGG GACGCGAGCC GCCCGCGGCG
GGACGCGAGC CCGTCGCGAA CGTCAACGGG GTCACGCCGT CCTTCGTGCC CACGCTCCAG
ATCAAGCTGC TCGCCGGCCG GAACTTCACG GCCGCCGACG ATGCCTCCGC CCCGCCCGTG
GCGATCATCA GCGAATCTAT GGCGCGCGCC TTGTTTCCGA ACGAAGATCC CATCGGACGC
CGGATCGGCG GGCTCGACCC GAAGAACCGC GGCTGGATGG AGATCGTCGG CGTGATGCCG
GACCTGCGCT TCGCGTTCAG CGTCACCGCC CCGGCCACCC GCTACCAGGT CTTCCGCCCG
CTGGCCCAGG AGACGTGGAA TTTCGTCACG GTCGCTGTTC GCACCCGCGA TCCTGCACCG
CTGGCCGAAC CGCTGCGCCG CACGGTGCTC GAGCTGGATT CAACCCTCGC GATCCAGCAG
CTCGGCACGG TCGACCAGCT CATCGAGCTG GGCACCGGGG GGCTCCACAT GGTGAATACC
ATCCTTGTCG CCTTCGCCCT GCTCGGCGTC TTCCTCGCCG CTCTCGGGCT CTATGGCGTG
ATCGCCCGCC TCGTCGTTCA ACGCACGCCG GAGATCGGCG TGCGCGTGGC GCTCGGCGCG
CAGAGTAGCG ACGTCGTCTG GCTGATTCTC CGCGCCGGTC TCACGCTCAC CCTCGTCGGC
ACGCTGATCG GTTTGGCCGG CGCGTTCGCA CTCGGCCGGC TGCTTGCCAT GGCCACGCCA
GAGTTGGTCT CTAATGACCC GCTCGCCATC GCCGCCGTCA CGCTGCTGCT GGGCGTCATC
GCGCTCGCCG CCTGCTGGCT GCCGGCGCGG AAGGCCCTCC GCGTGAACCC CATCGATGCG
CTCCGCGCCG AGTAG
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| Protein sequence | MIADLKFAFR QLLKSPGFTI VSVLTLALGI GLNTSMFSLL DTLLLQPLPF PDKPHLVRIY
RTTPQSQTAN HTVPDYLELE REAADFATLA AYQAWGMTLE QPDRPSVNLI ALRVTASFFP
ALGLQPELGR YFTADEDHPG NRAVMLSHAT WQAQFGGDPA VIGRTVRIDG EPCTIVGVMP
ARFASVFLWG PAQAFRPYAF SDKERVDRED TRVQILGRYR IGLSLEQLNA RFAALAVRLA
PLRPSTQSED GLRAVPLQST VSNPATLGIS LLLLGLAGFV LVIACSNLAN LQLSRAIARA
HEFAIRAALG ASRRRLLLPL LCESVLLSVA GGGCGVLVAA WSNEWISSRL SANGFVAFTL
ELDWRVLSFA LAVSLLTGIG FGLVPAWLMA RVRVNDTLKT GTRGNTGGRA QNRMRHALIV
AQFSLALVLL AGAGLFIRGM NRMLVRDLGW NHDGVLQVVL NLPEARYPTG AETLSFYTRL
QERVAALPGV DDVAVGWTLP VFQFLTSRNY LVEGREPPAA GREPVANVNG VTPSFVPTLQ
IKLLAGRNFT AADDASAPPV AIISESMARA LFPNEDPIGR RIGGLDPKNR GWMEIVGVMP
DLRFAFSVTA PATRYQVFRP LAQETWNFVT VAVRTRDPAP LAEPLRRTVL ELDSTLAIQQ
LGTVDQLIEL GTGGLHMVNT ILVAFALLGV FLAALGLYGV IARLVVQRTP EIGVRVALGA
QSSDVVWLIL RAGLTLTLVG TLIGLAGAFA LGRLLAMATP ELVSNDPLAI AAVTLLLGVI
ALAACWLPAR KALRVNPIDA LRAE
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