Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1856 |
Symbol | |
ID | 6206850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2307606 |
End bp | 2310269 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641691504 |
Product | permease |
Protein accession | YP_001818739 |
Protein GI | 182413673 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAGG AACTCCGCGC GCATCTAGAC CGCGAGACCG AGCAAAACCT CGCCCGCGGC CTGTCGCCGG CCGACGCCCG CTACGCTGCG CTGCGCGCGT TCGGCGGCGT CGAGCAGATC AAGGAGCGCG CGCGGGACGA CCGCGGCTTC GTCTGGCTCG AGCAACTCGC GCAGGACATC CGGCAGGCCG CCCGGCAACT GATGCGAGCG CCCGGCTTCA CCGCCACCGT CGTGCTCACG CTCGCGCTCG GCTTGGGCGT GAACACGAGC GTATTCCTCC TGGTGAGCGA CTTCTTCCTG CGCCCGCTGG CGGTGAAGGA GCCAGGAGAA CTCGTCCATG TTCTCCAGAA AAGTCCTCGG TTCGGATTCC CGCTGAACCT GTCCTTCCCT GATTTTCTCG ATTTTCGAAA AGCGATCGCG ACGGACGGCG AAACCGATGC CGCGATGGCG GCGGCTTTTT CCGACGTGCT CGCATACCAG CAGCTCACGG TGTCGTTGGG CCGGACGGAC GCCGGGGCCG AGCGAACGTG GATTGCTGCG GTGAGCGACA ACTTCTTTTC GGCCTTGGGC CTGGAGCCGG CGCACGGTCG GTTGTTCGCG GCCAACGAGG GCCGCGTCCC CGGCGCCGAT CCGATCATCG TGTTGACGGA AGCCTGCTGG CGCAGCCGCT TCGGCGGCGA TCCTCGCGTC ATCGGTCAGC CGGCGACGAT CAACGCGCTC ACCTTCACGA TCGTCGGCGT CACCCCCACG GGGTTTCACG GCGCCCAGTG GTCCGACGCC ATGAGCGGTT TCGTGCCCGC CTCGATGTTG CCCGTGCTGC AGCCGGCCAA CGGCGGCGTG TTGGACAATC GCGGTCAGTT GGCCTTCAAC GTCATCGCGC GCCAGCGCCC GGAGGTGACG CTGGAGCAGG CGCAATCCGC AGCCGAAGTC GTCCTCGCGC GGCTTATCGC GACCTACCCG GAATACCACG CACCGGCACG AGCCCAGCTA CTGCCCGAAC GGTGGAGTCG GCCCGCGCCC AAAGCGTCCC GTTTCACCAT TTCCATCATG GCGGTACTGG CGATTGGCGC GTTGCTGGTA CTGGGCATGG CGGTCGCGAA TGCGGCCAAT CTGCTGTTCG CGCGCGCCGT GGCGCGCGAG CGCGAGTTGG CGGTGCGCGG TGCGCTCGGC GCCTCGCGCT GGCGGTTGCT CCGGCCCCTG CTCGTCGAAG CCGTGCTCAT GGCAATCCTC GCCGGCGCGT TTGCGCTGGT CCTGGCGGAT TGGGTGGATG CGTGGCTGAG GTCGCTGCTG GCTGTGTTGG GCGACATTCC GCCGTTGGCC GAGCACGGCG CGGACTGGCG CGTCTTCGTC TTCACCGGTG GGATGGCGCT CGTCGCCGGC GTGCTGGCAG CGCTCTGGCC CGCGCTCCGG GCGGCACGCC AGGACGTATT GCCGATGCTG AAGGAAGCCT CGCCGACACC GGGGAAATCG CACCACCGGT TGCGGAGCCT GCTCGTCGTG ACGCAGGTTA CCCTGGCGTG CATCGTCCTC ATCGCTGCAG GACTCGGCCT GCGCAGCACG CGCGCGCTGG CCGGCGTTCA TCCCGGTTTT CGGTCCGACC ACCTGCTACT GGCTTCCTAC GATTTGAGCC TGCAACGTTA CGTGTTGCGC AACGGTCTTC TGCGCGCGCA GCAATTTCAC GCCGAGGTGC TCGACCGGGT CGCGCGGCTG CCGGGCGTGA AGAGCGTCAG CCTCGCCGAA CGCGTGCCGT TCGACGTCGA TCCCAGTATG GCCGGAGATG TTGTTCCCCA AGGGCGGCGC GGAGGTGACA ACACGCGTTT CCGGCTCACG CCCGTGCACG CCGTGACGCA CACGTTTCTG GAAACGATGG GCATCCCCCT CGCGTCCGGC CGCGACTTTC GCGCCAGCGA CGACAGGAAT GCACCGCCCG TCGCGATCGT CACCGAGTCG CTCGCGCGCC GGCTTTGGCC GGGCGAGCCC GCCATCGGCC GCCGGCTCGT CATTAACGGC GGCGCGCCGA CTGAAATCGT CGGCGTGATC CGTGATGGCA GGTTTGTCGC GCTAGCGGAC CCGTCTTGGG AAGCGGTATA TCTGCCCTTG GCCCAAAACT TCCGCGGCGG CGTGACGCTC GTCGTGCGCA CCGAGGGCGA ACCACTGGCG CTGGCGCAGG CGGTCGAGCG CCAGATCCGC GCGATGGAGC CCGATCTGCC CGTCTACAAC GTCCGCACCA TGGAGCAACA GATCGCGCAG AGCCCGATGG CGTTGATGCC GCTTCGCTTT GGCGCTGCGG TGGTGGGAAT GCAGGGATTG CTGGCGCTCG TGCTCGCGTT GACCGGTATC TACGGACTGG TGTCGTTCCA TGTCGCCCGC CGCACGCGCG AGATCGGGGT GCGCATGGCC CTCGGAGCCA CCGCCGCGAA CGTGGTCCGC GCGGTCGCGC AGCAGGGCGT CCGGCTGACG CTCACCGGCT TGGCGTTGGG CCTGCCGCTC GCCTATGGTG CGATCTTGCC ATTGAAGGGC CTCCTCTACG GCACCCCAGC GAACGACGGG CTCGTGTTTG CCGGCATCGG GTCGCTGATC CTCATGATCG CGCTGTTGGC GAGCGGCATC CCGGCCTGGC GGGCCGCGCG CGTGAACCCG GTGGACACGT TGCGCGCGGA GTGA
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Protein sequence | MDEELRAHLD RETEQNLARG LSPADARYAA LRAFGGVEQI KERARDDRGF VWLEQLAQDI RQAARQLMRA PGFTATVVLT LALGLGVNTS VFLLVSDFFL RPLAVKEPGE LVHVLQKSPR FGFPLNLSFP DFLDFRKAIA TDGETDAAMA AAFSDVLAYQ QLTVSLGRTD AGAERTWIAA VSDNFFSALG LEPAHGRLFA ANEGRVPGAD PIIVLTEACW RSRFGGDPRV IGQPATINAL TFTIVGVTPT GFHGAQWSDA MSGFVPASML PVLQPANGGV LDNRGQLAFN VIARQRPEVT LEQAQSAAEV VLARLIATYP EYHAPARAQL LPERWSRPAP KASRFTISIM AVLAIGALLV LGMAVANAAN LLFARAVARE RELAVRGALG ASRWRLLRPL LVEAVLMAIL AGAFALVLAD WVDAWLRSLL AVLGDIPPLA EHGADWRVFV FTGGMALVAG VLAALWPALR AARQDVLPML KEASPTPGKS HHRLRSLLVV TQVTLACIVL IAAGLGLRST RALAGVHPGF RSDHLLLASY DLSLQRYVLR NGLLRAQQFH AEVLDRVARL PGVKSVSLAE RVPFDVDPSM AGDVVPQGRR GGDNTRFRLT PVHAVTHTFL ETMGIPLASG RDFRASDDRN APPVAIVTES LARRLWPGEP AIGRRLVING GAPTEIVGVI RDGRFVALAD PSWEAVYLPL AQNFRGGVTL VVRTEGEPLA LAQAVERQIR AMEPDLPVYN VRTMEQQIAQ SPMALMPLRF GAAVVGMQGL LALVLALTGI YGLVSFHVAR RTREIGVRMA LGATAANVVR AVAQQGVRLT LTGLALGLPL AYGAILPLKG LLYGTPANDG LVFAGIGSLI LMIALLASGI PAWRAARVNP VDTLRAE
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