| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1845 |
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| Symbol | |
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| ID | 6205288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2292703 |
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| End bp | 2295072 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641691493 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001818728 |
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| Protein GI | 182413662 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.418755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGC CTCCTTCTCA CCTGCGCCTG CACCTCACGC TCTGGTCCGT CGGCATGTTC
ACCGCGGCGT CAGCGGCCGT CACACCGCCG CCCGATCTCA CGGCACCAGC GCGTCCTTTC
GCCGAGGGAA TCATTTCCAC TCCGGAGAGT TTCGGCGCAA GCTTCAGCCC GGACGGCAGA
ACCTTTTATT TCGCCCGCGC GCTGCCGCCC CGCGGTCTGC CGACGATCCT GTGTTCCCAC
CTGTGCGATG GGCAGTGGAC CGAGCCGGAA ATCGTCCCGA TTGACGGGGC ATCCGGCGAA
GGCGACGCGT CGCTGTCCCC GGACGGCGCG CGGCTGTTCT TCTGGTCCCG GCGAACTGCG
CCCGGCAAGC CCGCCGGCTC GCGCCCGATT CCTGATCTTT GGTTCGCCGA ACAACGCGAC
GGCAGGTTCG GGCCCGCCCA TTCCGTCGGC GAAACGGATA CCGCGGCCTG GACGCCGCTC
TCGCTGCGCT TTGGCGGTCC GTCCGTCGCG GCCGACGGCA CGCTCTACGC CTTTCGCGGT
GCGGCCGCGA CAGGCGGTCC GCCGCGGCTC GTTCGGGCGC CACTCGTCAG CGGACGCTAT
CTCGCATTTG AGGATCTCGG CGAAGGGCTC AACGCCAACG GCGGCGGGTT CGACCCCTAC
GTTGCTCCGG ACCAGCACTA CCTGGTGTTC TCCAGCGATC GCGCCGATTC CCACGGCAAC
GCCGACCTCT ATCTCAGCCT GCGCGCCGCC GACGGAAGCT GGTCGATCCC ACGGAATCTC
GGACCGGCGG TGAATTCCGA CGCAGCGGAA TACGAACCCG CCATCTCACC CGACGGCCGA
CTGCTCGTGT TCACGCGCGA GCGCCTTGGC ATCTTCGTCA TCGAAGTCCG CGCGCTCGGG
CTGGATCTTT CGCCGGAAGC AAACAAAGCT GCGCGCGATG TGAGTCCGCG TGCGAAGGCG
GTGGGAAATG ACACGCCGGC TACGCTGCGG GCAGAGCTGG TGGGCGCCGC CGCGTGCGCG
GGGGTGCGGC CGCCCCCGGA AGCCACCCTG TTCGAGGAGG GGCTGATCTC CACGCCCGAC
TCTTTCGCCG CGACGTTCAC GCCTGATGGG GCCACGCTCT ACTTCTGTCG TTCCTCAGGT
GTTCGCCCCG ATCGTCGAAG CAGGATCATG GAATCGCACT ATGCCGATGG CCGCTGGAGT
GTGCCGCAGC CGGTGCCGTT CTCGGGCGAA TTCAACGATT TTGACCCGAA CCTCTCGCCG
GACGGCGAGC AGCTCTTCTT CGCCTCCGTG CGACCAGAAA GCGGGCCGCG TCCCGCGCTT
TGGGTCGTCG AACGCACCGC CGCCGGCTGG AGCGCCGCCC GCAGCCTCGG CACCATCGCC
GGCATGGACG GGGTGACCGT GTTCCCCTGT CCGACCGCGA GCGGCAATCT CTACTTCGCC
GGACATGCGA CCGGATTGGC GTCGCACGGC GATGATGATA TTTACGTGTG CCGACGACAC
TCGGACGGCC GCTACGGCCC GCCCGAGAAT CTCGGGCCTG CGGTCAATTC GCCGTTTCAG
GACTACGACG GCTACGTCGC GCCGAACGAG AGTTTCATCA TCTTCTGCAG CCGGCGCCCG
GGCGGGATCG GCCCGAGCGA TTTCTATGTC AGCACGCGCG AAAACGGCGG CTGGAGCGCC
GCGCGTAATC TGGGGCCGCT GATCAACTCG GCGAGCGTTC GCGGCGTCTG CTGTCCATCG
GTTTCCCCTG ATCGGCGCTG GTTCTACTTC ACCAGCAGCC GCAACGAACG ACCGGGCATC
TACCGAATCG AGTTCAAAGC GCTCGGGCTG GCCTCGCGCG CGAGTGCGGC TGCGCCTGCC
GCTCCCGCGC CGCGATCGGC AGGCGGGCAG GCTGCTCCCG CCCCCGAGCT GTTCGGAGGC
GGCGCCGTCA AAGCAGCAGC CCGACGTTTT CTCCGGACGG CGCAACCGTG TTCACGCACC
TCTACAGCGA CACGGAGAAA AAGCACACGA TCTTGGTTTC GCATTGGCGC GAGGGCCGAT
GGACGCCGTC CGAGATCGCG CCATTCTCGG GGGTGCACGA CGAGATGGAG CCTGCGTTCA
GTGCGGACGG AAAACGGCTG GTGTTCGCTT CGTACCGGCC GGTGGCGGGA GCGCTCGACG
CGATGCGACT CTGGTGCGTG GAACCCACGG ACACCGGCTG GAGCGAGCCC CGATTGCTGC
CGATCGCGGA AGCTGGCGAT GGAGCGCGTT CTGGAGCGCC CTCGCTCGCG CGCGATGGCG
CGCTGTATTT CGGTCATTTG CGCGACCGTG GCTGGCCATG GGAGATCTAC TGCGCCCGAT
ACGAAAACGG CCGCTACGGC GAGCCGATGA
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| Protein sequence | MKPPPSHLRL HLTLWSVGMF TAASAAVTPP PDLTAPARPF AEGIISTPES FGASFSPDGR
TFYFARALPP RGLPTILCSH LCDGQWTEPE IVPIDGASGE GDASLSPDGA RLFFWSRRTA
PGKPAGSRPI PDLWFAEQRD GRFGPAHSVG ETDTAAWTPL SLRFGGPSVA ADGTLYAFRG
AAATGGPPRL VRAPLVSGRY LAFEDLGEGL NANGGGFDPY VAPDQHYLVF SSDRADSHGN
ADLYLSLRAA DGSWSIPRNL GPAVNSDAAE YEPAISPDGR LLVFTRERLG IFVIEVRALG
LDLSPEANKA ARDVSPRAKA VGNDTPATLR AELVGAAACA GVRPPPEATL FEEGLISTPD
SFAATFTPDG ATLYFCRSSG VRPDRRSRIM ESHYADGRWS VPQPVPFSGE FNDFDPNLSP
DGEQLFFASV RPESGPRPAL WVVERTAAGW SAARSLGTIA GMDGVTVFPC PTASGNLYFA
GHATGLASHG DDDIYVCRRH SDGRYGPPEN LGPAVNSPFQ DYDGYVAPNE SFIIFCSRRP
GGIGPSDFYV STRENGGWSA ARNLGPLINS ASVRGVCCPS VSPDRRWFYF TSSRNERPGI
YRIEFKALGL ASRASAAAPA APAPRSAGGQ AAPAPELFGG GAVKAAARRF LRTAQPCSRT
STATRRKSTR SWFRIGARAD GRRPRSRHSR GCTTRWSLRS VRTENGWCSL RTGRWRERST
RCDSGAWNPR TPAGASPDCC RSRKLAMERV LERPRSRAMA RCISVICATV AGHGRSTAPD
TKTAATASR
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